Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82544192

Identifier: 82544192

GI number: 82544192

Start: 1691451

End: 1692137

Strand: Reverse

Name: 82544192

Synonym: SBO_1709

Alternate gene names: NA

Gene position: 1692137-1691451 (Counterclockwise)

Preceding gene: 82544194

Following gene: 82544189

Centisome position: 37.44

GC content: 48.47

Gene sequence:

>687_bases
ATGACCCCAATAAACATATTTATGACAGTTGCTGATTTCAAACGGCCCAAATTGGAGCTCCCAAACGGGGCAAACAAACT
ACTACTGCACTCTTGCTGTGCTCCATGTTCCGGTGAGGTGATGGAGGCGCTTCAGGCCTCGGGAATCGACTACACCATCT
TTTTCTACAACCCGAACATTCATCCTCAGAAAGAGTATTTAATTCGTAAGGATGAGAATATTCGCTTTGCTGAACAACAC
GGCGTGCCGTTTATTGATGCTGATTACGACACAGACAACTGGTTTGAACGAGCCAAAGGAATGGAATGGGAGCCCGAACG
AGGGATCCGTTGCACCATGTGTTTTGACATGCGTTTTGAGCGGACAGCGCTGTACGCCGCTGAAAATGGTTTCAGTGTGA
TCAGCAGTTCACTGGGCATTTCACGCTGGAAAAATATGCAGCAGGTTAACGACTGTGGGCGGCGAGCCGTCGCGCATTAT
CCGGGCATGGTGTACTGGGATTATAACTGGCGCAAGCAGGGAGGCTCGTCCCGTATGATTGAAATCAGCAAGCGCGAAAA
ATTCTATCAGCAGGAATATTGTGGCTGTGTGTATTCTCTGCGCGATACCAATCTACACCGCAAATCTCAGGGACGCCCTC
TTATCAAAATTGGTCAACTCCACTACGGTAAAGAAGAGAAGGAGTGA

Upstream 100 bases:

>100_bases
TGGCCAAATTCAGTGTGCCACTTCAGCCCGAAAGGGCGGGGAGCAGTCACACATCTGTTTCCGATAGCCCCGTTCTAATG
CTACACTCTTTGATATTTTT

Downstream 100 bases:

>100_bases
TTTTATGGGGCACCTTTCTGATTGATTTCATATTGGCGAGGTAAGTAGAATGACTGCGGGTGCTTGAGGCTATCTGCTTC
AGGCTATCTGCTTCAGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTPINIFMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQH
GVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHY
PGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE

Sequences:

>Translated_228_residues
MTPINIFMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQH
GVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHY
PGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
>Mature_227_residues
TPINIFMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQHG
VPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYP
GMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE

Specific function: Unknown

COG id: COG1636

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003828 [H]

Pfam domain/function: PF02677 DUF208 [H]

EC number: NA

Molecular weight: Translated: 26655; Mature: 26523

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPINIFMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNI
CCCEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCC
HPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFE
CCCHHHEEECCCCCEEHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCC
RTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWDYNWRKQGGSSRMI
CEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE
EISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
EEHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCEEEECCEECCCCCCC
>Mature Secondary Structure 
TPINIFMTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNI
CCEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCC
HPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFE
CCCHHHEEECCCCCEEHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCC
RTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWDYNWRKQGGSSRMI
CEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE
EISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
EEHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]