| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is hslJ
Identifier: 82544173
GI number: 82544173
Start: 1671139
End: 1671561
Strand: Direct
Name: hslJ
Synonym: SBO_1687
Alternate gene names: 82544173
Gene position: 1671139-1671561 (Clockwise)
Preceding gene: 82544172
Following gene: 82544174
Centisome position: 36.97
GC content: 46.81
Gene sequence:
>423_bases ATGAAGAAAGTAGCCGCGTTTGTTGCGCTAAGCCTGCTGATGGCGGGATGTGTAAGTAATGACAAAATTGCTGTTACGCC AGAACAGCTACAGCATCATCGCTTTGTGCTGGAAAGCGTAAACGGTAAGCCCGTGACCAGCGATAAAAATCCGCCAGAAA TCAGTTTTGGTGAAAAAATGATGATTTCCGGCAGCATGTGTAACCGCTTTAGCGGTGAAGGCAAACTGTCTAATGGTGAA CTGACAGCCAAAGGGCTGGCAATGACCCGTATGATGTGCGCTAACCCGCAGCTTAATGAACTCGATAACACCATTAGCGA AATGCTGAAAGAAGGTGCACAAGTGGATCTGACCGCGAACCAGTTAACGCTGGCGACCGCGAAACAGACATTAACTTATA AGCTGGCGGATTTAATGAATTAA
Upstream 100 bases:
>100_bases CCCCTGCAATCCAGGGGAGCTGATTCAGATAATCCCCAATGACCTTTCATTCTCTATTCTTAAAATAGTCCTGAGTCAGA AACTGTAATTGAGAACCACA
Downstream 100 bases:
>100_bases TAGCTGCCACAGCTCCCGGCGGCAAGTGACTGTTCGCTACAGCGTTTGCCGTTGGGTAATGCACACATCCCAATCGCCGT GCCATCCAGTTGACGGGCAA
Product: heat-inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGE LTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN
Sequences:
>Translated_140_residues MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGE LTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN >Mature_140_residues MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGE LTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787644, Length=140, Percent_Identity=100, Blast_Score=288, Evalue=9e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLJ_ECOLI (P52644)
Other databases:
- EMBL: U36928 - EMBL: U00096 - EMBL: AP009048 - PIR: F64888 - RefSeq: AP_002006.1 - RefSeq: NP_415897.1 - PDB: 2KTS - PDBsum: 2KTS - ProteinModelPortal: P52644 - DIP: DIP-9946N - STRING: P52644 - EnsemblBacteria: EBESCT00000000093 - EnsemblBacteria: EBESCT00000017810 - GeneID: 946525 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1374 - KEGG: eco:b1379 - EchoBASE: EB2973 - EcoGene: EG13181 - eggNOG: COG3187 - GeneTree: EBGT00050000008379 - HOGENOM: HBG625795 - OMA: EFGEKMH - ProtClustDB: PRK10449 - BioCyc: EcoCyc:G6702-MONOMER - Genevestigator: P52644 - InterPro: IPR005184
Pfam domain/function: PF03724 META
EC number: NA
Molecular weight: Translated: 15166; Mature: 15166
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKM CHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE MISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTAN EEECCHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECC QLTLATAKQTLTYKLADLMN EEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKM CHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE MISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTAN EEECCHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECC QLTLATAKQTLTYKLADLMN EEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9025293; 9097039; 9278503; 8349564