| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yneK [H]
Identifier: 82544134
GI number: 82544134
Start: 1631663
End: 1632370
Strand: Direct
Name: yneK [H]
Synonym: SBO_1645
Alternate gene names: 82544134
Gene position: 1631663-1632370 (Clockwise)
Preceding gene: 82544133
Following gene: 82544135
Centisome position: 36.1
GC content: 43.08
Gene sequence:
>708_bases ATGGGGCGCGTATTTCACACCGGCGTCGAGCGTGTGCTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGAT CCACCTTGGCGTCCCCATCAAAAAAGCGCATACACCACATATTGAACCCCTGCCTCCGGATCACCATACCGCTGCAGATT ACTTACGCCAGTTTGATTTGCTTGTCCTGAATTTTATCTCTCGCGGTAATTTTGTCATACTCCCCCGATTATGGAGTAAC TCTGAGGTTCACAGATGGTTCGTCAATAAAGATCCTAACTTGATCACCGCCATTCTCGACATAACAGACGGCGAATTAAA AGAGGATTTATTGCAAAGCCTGATGGATTCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTAT CCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGGACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAA TTTATGAATCCCAATGAAAGTGATCTGAATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATAT GGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAAGTTACTCACGAAGACCTGGTGAAAAACAGGC CTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAA
Upstream 100 bases:
>100_bases AATTTCAGGTAGTAATAAATTTAAACCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTGCGCTC CCAACCCAAAGCCTGTCACT
Downstream 100 bases:
>100_bases ACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCA TTGTATTCACATCATTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSN SEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQ FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH
Sequences:
>Translated_235_residues MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSN SEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQ FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH >Mature_234_residues GRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSNS EVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQF MNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787807, Length=235, Percent_Identity=96.5957446808511, Blast_Score=465, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27142; Mature: 27011
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDL CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH LVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGS HHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC NKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSD CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCH DKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDL CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH LVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGS HHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC NKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSD CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCH DKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]