Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yneK [H]

Identifier: 82544134

GI number: 82544134

Start: 1631663

End: 1632370

Strand: Direct

Name: yneK [H]

Synonym: SBO_1645

Alternate gene names: 82544134

Gene position: 1631663-1632370 (Clockwise)

Preceding gene: 82544133

Following gene: 82544135

Centisome position: 36.1

GC content: 43.08

Gene sequence:

>708_bases
ATGGGGCGCGTATTTCACACCGGCGTCGAGCGTGTGCTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGAT
CCACCTTGGCGTCCCCATCAAAAAAGCGCATACACCACATATTGAACCCCTGCCTCCGGATCACCATACCGCTGCAGATT
ACTTACGCCAGTTTGATTTGCTTGTCCTGAATTTTATCTCTCGCGGTAATTTTGTCATACTCCCCCGATTATGGAGTAAC
TCTGAGGTTCACAGATGGTTCGTCAATAAAGATCCTAACTTGATCACCGCCATTCTCGACATAACAGACGGCGAATTAAA
AGAGGATTTATTGCAAAGCCTGATGGATTCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTAT
CCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGGACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAA
TTTATGAATCCCAATGAAAGTGATCTGAATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATAT
GGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAAGTTACTCACGAAGACCTGGTGAAAAACAGGC
CTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAA

Upstream 100 bases:

>100_bases
AATTTCAGGTAGTAATAAATTTAAACCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTGCGCTC
CCAACCCAAAGCCTGTCACT

Downstream 100 bases:

>100_bases
ACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCA
TTGTATTCACATCATTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSN
SEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQ
FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH

Sequences:

>Translated_235_residues
MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSN
SEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQ
FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH
>Mature_234_residues
GRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSNS
EVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQF
MNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787807, Length=235, Percent_Identity=96.5957446808511, Blast_Score=465, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27142; Mature: 27011

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDL
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGS
HHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
NKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSD
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCH
DKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPLPPDHHTAADYLRQFDL
CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGS
HHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
NKHVLPEVCICFLSLLAEQESPHFQDLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSD
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCH
DKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]