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The map label for this gene is 82544129

Identifier: 82544129

GI number: 82544129

Start: 1625222

End: 1625428

Strand: Direct

Name: 82544129

Synonym: SBO_1638

Alternate gene names: NA

Gene position: 1625222-1625428 (Clockwise)

Preceding gene: 82544128

Following gene: 82544133

Centisome position: 35.96

GC content: 48.79

Gene sequence:

>207_bases
ATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGC
CATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGG
AAAAGCGATACTGGAAAAACTCTAACTCGGTGGCCAGTTTTTGTTGA

Upstream 100 bases:

>100_bases
GTGTTGACGAACTCCTGCCATGGAACGTAGCACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACGAA
ACTGCTGGGATAACAGCCCA

Downstream 100 bases:

>100_bases
CCACTTCACCCCTTCTCATTCAGGCCACGGATAATGGTGGTGTACAGACCATCCTGCGTGCTCAGTGACGGCGGGAATGA
AGTTTCAATCGGACGAACAA

Product: IS911 ORF2

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase Orfab Subunit B; Transposase And Inactivated Derivatives; Transposase OrfAB Subunit B; Transposase OrfAB; ISPsy12 Transposase OrfB; ISSwp4 Transposase OrfB; Integrase Catalytic Region; Integrase Core Subunit; ISPsy24 Transposase OrfB; Transposase ORF B IS3 Family; Transposase ORF B IS; IS3 Family Transposase

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEKRYWKNSNSVASFC

Sequences:

>Translated_68_residues
MERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEKRYWKNSNSVASFC
>Mature_68_residues
MERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEKRYWKNSNSVASFC

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7899; Mature: 7899

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEKRYWKN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC
SNSVASFC
CCCCCCCC
>Mature Secondary Structure
MERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEKRYWKN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC
SNSVASFC
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA