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The map label for this gene is 82544124

Identifier: 82544124

GI number: 82544124

Start: 1621564

End: 1621965

Strand: Reverse

Name: 82544124

Synonym: SBO_1633

Alternate gene names: NA

Gene position: 1621965-1621564 (Counterclockwise)

Preceding gene: 82544125

Following gene: 82544123

Centisome position: 35.89

GC content: 53.98

Gene sequence:

>402_bases
ATGAACAGGCACACACAAATCCGCCAGGCAGTACTGGCAAGCCTGAAGGGCGAATGCGGGGGGAATGTCGTGCTTTTTGA
CGGGCTTCCGGCATTTATTGATGCGCAGGAACTGCCCGCCGTGGCGGTGTGGCTGAGTGATGCGCAGTACACCGGAAAAA
TGACGGATGAGGACGACTGGCAGGCTGTTCTGCATATTGCCGTTTTCGTCCGTGCACAGGCGCCGGATTCTGAGCTGGAT
ACGTGGATGGAGAACACCATATTTCCGGCCATGAAGGATATTCCGGTGCTTTCCGGACTCATCGACACCATGATCCCACT
CGGTTTTAACTATCAACGTGATAATGAGATGGCCACCTGGGCGATGGCGGAAATCACGTACCAGATCACGTACACGAATT
AA

Upstream 100 bases:

>100_bases
TGACACAGGCATTTGAGGATGCCCGCGATCGCATCATTGCCGCGGAAATGCCGAAACAGCTGGGGTATGCCCTGAAACAG
CAACTGAGGATACATTTGGG

Downstream 100 bases:

>100_bases
GGAGGTGGCAATGACCACACCAAATCCACTGGCAAAGACGAAAGGTGCGGGAACGACGTTCTGGATGTACACCGGCAAGG
GCGATGCGTTTGCGAACCCT

Product: tail component of prophage

Products: NA

Alternate protein names: Phage Minor Tail Protein U; Tail Component Of Prophage; Gifsy-1 Prophage VmtU; Minor Tail U

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELD
TWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATWAMAEITYQITYTN

Sequences:

>Translated_133_residues
MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELD
TWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATWAMAEITYQITYTN
>Mature_133_residues
MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELD
TWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATWAMAEITYQITYTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14899; Mature: 14899

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDW
CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
QAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATW
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHE
AMAEITYQITYTN
EEEEEEEEEEECC
>Mature Secondary Structure
MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVWLSDAQYTGKMTDEDDW
CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH
QAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLIDTMIPLGFNYQRDNEMATW
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHE
AMAEITYQITYTN
EEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA