| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82544121
Identifier: 82544121
GI number: 82544121
Start: 1620031
End: 1620252
Strand: Reverse
Name: 82544121
Synonym: SBO_1630
Alternate gene names: NA
Gene position: 1620252-1620031 (Counterclockwise)
Preceding gene: 82544122
Following gene: 82544120
Centisome position: 35.85
GC content: 53.15
Gene sequence:
>222_bases ATGCAGAGCTTCAGTGATGTGTGGATGGATGCGCAGTTTGCCTCGCTGAAGGCATTGATCGTGAGAATGGTGTCCGGCAG CAGTGATGCTGCGGTGGCTGATTTCAGCCTTTTACCGGAAGAGAACGGGATACCGGAGCGAACGGACGAAGAACTGATGC ATCTTGGGGAAGGTATTTCCGGAGGTGTGCGTTATGGACCAGATAGCCAACCTGGTCATTGA
Upstream 100 bases:
>100_bases TTGTCATGCGGCTTGCCCGGGAGTTCCGGCGGGCAGACTGGCGGCGGATGCTGTCGGAAATGTCGGCCACTGAGCTTGGT GAGGGGGCGATTATTTCCGG
Downstream 100 bases:
>100_bases TTTGGGGATTGATGCGGCAGAGTTTAAAAATGAAATTCCCCGTATCAAAAACCTTCTGAATGGTGCAGCCGGTGATGCAG AACGGTCTTCTGCCCGTATG
Product: tail component of prophage
Products: NA
Alternate protein names: Minor Tail Protein; Minor Tail-Like Protein
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH
Sequences:
>Translated_73_residues MQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH >Mature_73_residues MQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7839; Mature: 7839
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGIS CCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCC GGVRYGPDSQPGH CCCCCCCCCCCCC >Mature Secondary Structure MQSFSDVWMDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGIS CCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCC GGVRYGPDSQPGH CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA