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The map label for this gene is ydeJ [H]

Identifier: 82544102

GI number: 82544102

Start: 1599358

End: 1599807

Strand: Direct

Name: ydeJ [H]

Synonym: SBO_1611

Alternate gene names: 82544102

Gene position: 1599358-1599807 (Clockwise)

Preceding gene: 82544100

Following gene: 82544104

Centisome position: 35.39

GC content: 51.33

Gene sequence:

>450_bases
TTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAACTACCGCCGAATCATGCACCGGCGGTAAGTTGGCTAGCGCCCT
GTGTGCAGCTGAAGATACACCCAAATTTTACGGTGCAGGCTTTGTTACTTTCACCGATCAGGCAAAGATGAAAATCCTCA
GCGTAAGCCAGCAATCTCTTGAACGATATTCTGCGGTGAGTGAGAAAGTGGCAGCAGAAATGGCAACAGGTGCCATAGAG
CGTGCGGATGCTGATGTCAGTATTGCCATTACCGGCTACGGCGGACTGGAGGGCGGTGAAGATGGTACGCCAGCGGGTAC
CGTCTGGTTCGCGTGGCATATTAAAGGCCAGACCTACACTGCGGTTATGCATTTTGCTGGCGACTGCGAAACGGTATTAG
CTTTAGCGGTGAGGTTTGCCCACGTCCAGCTGCTGCAATTACTGCTATAA

Upstream 100 bases:

>100_bases
GACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACC
TTGAAAACCTGACATCCGCG

Downstream 100 bases:

>100_bases
CCAGGCTGGCCTGGCGATATCTCCAGGCCAGCCATTGGTGGTGTTTATATATTCAAGCCACGATGTTGCAGCATCGGCAT
AATCTGAGGAGCCTTACCGC

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIE
RADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL

Sequences:

>Translated_149_residues
MSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIE
RADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL
>Mature_148_residues
SQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIER
ADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1787818, Length=139, Percent_Identity=97.841726618705, Blast_Score=281, Evalue=2e-77,
Organism=Escherichia coli, GI1789052, Length=150, Percent_Identity=38, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 15808; Mature: 15677

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSL
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
ERYSAVSEKVAAEMATGAIERADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYT
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEE
AVMHFAGDCETVLALAVRFAHVQLLQLLL
EEEECCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSL
CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
ERYSAVSEKVAAEMATGAIERADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYT
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEE
AVMHFAGDCETVLALAVRFAHVQLLQLLL
EEEECCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]