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The map label for this gene is ddpX [H]

Identifier: 82544062

GI number: 82544062

Start: 1563832

End: 1564413

Strand: Direct

Name: ddpX [H]

Synonym: SBO_1569

Alternate gene names: 82544062

Gene position: 1563832-1564413 (Clockwise)

Preceding gene: 82544061

Following gene: 82544063

Centisome position: 34.6

GC content: 53.09

Gene sequence:

>582_bases
ATGTCGGATACCACCGAACTGGTTGATTTAGCCGTAATCTTCCCTGATCTGGAGATCGAATTGAAATACGCCTGCGCTGA
TAACATCACAGGTAAAGCTATTTATCAGCAAGCGCGTTGTCTGCTACACAAGGATGCGATTACCGCGCTGGCGAAAAGTA
TCAGTATCGCCCAGCTGTCAGGCTTACAACTGGTGATTTACGATGCGTATCGCCCACAACAAGCACAGGCGATGTTGTGG
CAAGCCTGCCCAGACCCGCAATATGTTGTTGATGTGACGGTCGGTTCTAATCACAGCCGTGGCACGGCGATCGACCTGAC
GCTTCGTGATGAGCACGGGAACATCCTCGATATGGGCGCAGGGTTCGATGAAATGCACGAGCGCTCCCATGCCTATCACC
CTTCCGTCCCGCCCGCCGCTCAGCGCAATCGGCTGTTGCTGAATGCGATTATGACTGGTGGCGGTTTTGTCGGTATCTCC
AGCGAATGGTGGCACTTCGAATTACCCCAGGCAGCGAGTTACCCACTGCTCGCTGATCAATTCACCTGTTTTATATCCCC
TGGCACACAGCACGTCAGTTAA

Upstream 100 bases:

>100_bases
AATATAACTTTAAGCCAGCATTCTGGCGCTTATCCCGGCATGGCATGAGATCTGCATAAGCGGAAAGCGCAGCAATTTTT
GTCTTATACAGGAACCGTTT

Downstream 100 bases:

>100_bases
TCAGGAAACTGTCATGAAGAGATCGATACCGTTTCGTCCTACATTGCTCGCGCTCGTCCTTGCCACAACTTTCCCGGTTG
CGCACGCCGCCGTACCGAAA

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLW
QACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
SEWWHFELPQAASYPLLADQFTCFISPGTQHVS

Sequences:

>Translated_193_residues
MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLW
QACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
SEWWHFELPQAASYPLLADQFTCFISPGTQHVS
>Mature_192_residues
SDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQ
ACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISS
EWWHFELPQAASYPLLADQFTCFISPGTQHVS

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=193, Percent_Identity=99.4818652849741, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 21227; Mature: 21096

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS
CCCHHHEEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGA
CCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECC
GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ
CHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEECCC
FTCFISPGTQHVS
EEEEECCCCCCCC
>Mature Secondary Structure 
SDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS
CCHHHEEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGA
CCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECC
GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ
CHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEECCC
FTCFISPGTQHVS
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]