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The map label for this gene is ynfD [H]

Identifier: 82544047

GI number: 82544047

Start: 1536974

End: 1537294

Strand: Reverse

Name: ynfD [H]

Synonym: SBO_1552

Alternate gene names: 82544047

Gene position: 1537294-1536974 (Counterclockwise)

Preceding gene: 82544068

Following gene: 82544044

Centisome position: 34.01

GC content: 52.34

Gene sequence:

>321_bases
ATGCTATGCTTAAAGAAGTTATCTTCGCGTAAGGAGCTTATGATGAAACTCTCAACCTGCTGTGCCGCGCTTCTGCTCGC
CCTCGCCTCACCCGCGGTACTCGCCGCGCCGGGATCCTGTGAGCGCATACAGAGCGATATATCACAGCGCATTATCAATA
ATGGCGTACCCGAAAGCAGCTTCACATTAAGTATTGTACCCAATGACCAGGTTGATCAGCCTGATTCCCAGGTCGTCGGG
CATTGTGCTAATGATACGCATAAAATTCTCTACACCCGCACCACCAGCGCTAACGTCTCTGCTCCCGCGCAGTCTACCTA
G

Upstream 100 bases:

>100_bases
ATCGCGAGTAAGCATGGTAGTAATTTGTATTTCACAACAGTCACCAGAGAGTAGAGATGATTCTCAATCATAGTAGCAAA
TACAGTACTTTACACGTTAA

Downstream 100 bases:

>100_bases
GATGGCGCGCCTGCCGAACCGCAGTAATACATTATCGACTGAACGCCGGATATGACACATCCGGCGATTTGAACATACAA
CATAATCCCACCTTATTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLCLKKLSSRKELMMKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVG
HCANDTHKILYTRTTSANVSAPAQST

Sequences:

>Translated_106_residues
MLCLKKLSSRKELMMKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVG
HCANDTHKILYTRTTSANVSAPAQST
>Mature_106_residues
MLCLKKLSSRKELMMKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVG
HCANDTHKILYTRTTSANVSAPAQST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081940, Length=92, Percent_Identity=97.8260869565217, Blast_Score=155, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010595
- ProDom:   PD336997 [H]

Pfam domain/function: PF06649 DUF1161 [H]

EC number: NA

Molecular weight: Translated: 11273; Mature: 11273

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCLKKLSSRKELMMKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
FTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQST
EEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLCLKKLSSRKELMMKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
FTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQST
EEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]