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The map label for this gene is aroD [H]

Identifier: 82543939

GI number: 82543939

Start: 1414966

End: 1415724

Strand: Reverse

Name: aroD [H]

Synonym: SBO_1438

Alternate gene names: 82543939

Gene position: 1415724-1414966 (Counterclockwise)

Preceding gene: 82543940

Following gene: 161984945

Centisome position: 31.32

GC content: 50.46

Gene sequence:

>759_bases
ATGAAAACCGTAACTGTAAAAGATCTCGTCATTGGTACGGGCGCACCTAAAATCATCGTCTCGCTGATGGCGAAAGATAT
CGCCCGCGTGAAATCCGAAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTTTGCCG
ACCTCTCCAATGTGGAGTCTGTCATGGCGGCGGCAAAAATTCTCCGCGAAACCATGCCAGAAAAACCGCTGCTGTTTACC
TTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCTCTCAATCGTGCAGCCATCGACAG
CGGCCTGGTTGATATGATAGATCTGGAGTTATTTACCGGCGATGATCAGGTTAAAGAAACCGTCGCCTGCGCCCACGCGC
ATGATGTGAAAGTTGTCATGTCCAACCATGACTTCCATAAAACGCCGGAAGCCGAAGAAATCATTGCCCGTCTGCGCAAA
ATGCAGTCCTTCGACGCCGATATTCCTAAGATTGCGCTGATGCCGCAAAGTACCAGCGATGTGCTGACGTTGCTTGCCGC
GACCCTGGAGATGCAGGAGCAGTATGCCGATCGTCCAATCATCACAATGTCAATGGCAAAAACTGGCGTAATTTCTCGTC
TGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCCTCTGCGCCAGGGCAAATCTCGGTAAAT
GATTTACGCACAGTATTAACTATTTTACATCAGGCATAA

Upstream 100 bases:

>100_bases
TTCACGTTATGGACTGGCAAAGATTTCCCTCTGGAATATGTTAAACAGGTCATGGGGTTCGGTGCCTGACAGGCTGACCG
CGTGCAGAAAGGGTAAAAAA

Downstream 100 bases:

>100_bases
GCAATAATATTTCGGCGGGAATATCCTCCCCCGCCGAACTAAAAAAAATATATTCAACCGTATTTAATAAAAATATTTCG
TGAGTCTCTGTGCGCTAAAT

Product: 3-dehydroquinate dehydratase

Products: NA

Alternate protein names: 3-dehydroquinase; Type I DHQase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFT
FRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN
DLRTVLTILHQA

Sequences:

>Translated_252_residues
MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFT
FRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN
DLRTVLTILHQA
>Mature_252_residues
MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFT
FRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN
DLRTVLTILHQA

Specific function: Aromatic amino acids biosynthesis; shikimate pathway; third step. [C]

COG id: COG0710

COG function: function code E; 3-dehydroquinate dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I 3-dehydroquinase family [H]

Homologues:

Organism=Escherichia coli, GI1787984, Length=252, Percent_Identity=98.8095238095238, Blast_Score=504, Evalue=1e-144,
Organism=Saccharomyces cerevisiae, GI6320332, Length=208, Percent_Identity=27.4038461538462, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018508
- InterPro:   IPR013785
- InterPro:   IPR001381 [H]

Pfam domain/function: PF01487 DHquinase_I [H]

EC number: =4.2.1.10 [H]

Molecular weight: Translated: 27460; Mature: 27460

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS01028 DEHYDROQUINASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVES
CCCEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTG
HHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCHHHHEEHHHHHCCCCHHHHEEEEECC
DDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSD
CHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
VLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHH
DLRTVLTILHQA
HHHHHHHHHHCC
>Mature Secondary Structure
MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVES
CCCEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTG
HHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCHHHHEEHHHHHCCCCHHHHEEEEECC
DDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSD
CHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
VLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHH
DLRTVLTILHQA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA