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The map label for this gene is fadK [H]

Identifier: 82543932

GI number: 82543932

Start: 1404948

End: 1405280

Strand: Reverse

Name: fadK [H]

Synonym: SBO_1428

Alternate gene names: 82543932

Gene position: 1405280-1404948 (Counterclockwise)

Preceding gene: 82543934

Following gene: 82543929

Centisome position: 31.09

GC content: 43.84

Gene sequence:

>333_bases
ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC
ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCTGG
AAGAGGTGGTGGCTTTTTTTAGCCGTAAACGGGTCGCAAAATATAAATATCCTGAACATATCGTGGTAATCGAAAAACTA
CCGCGCACTGCCTCAGGTAAAATACAAAAGTTTTTGTTAAGAAAAGATATTATGCGGCGATTAACGCAGGATGTCTGTGA
AGAGATTGAATAA

Upstream 100 bases:

>100_bases
CGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGT
AGTTGCCATGTTTTACGGCA

Downstream 100 bases:

>100_bases
GTTTCATCTTCGGGGATCACATAAACCCGGCGACAAAACGCCGCCGGGTATTTATTTTATTTCTTCAGTTCAGCCAGGCT
TAACCAGGTTTGCACCACGG

Product: IS1 encoded protein

Products: NA

Alternate protein names: Acyl-CoA synthetase [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLEEVVAFFSRKRVAKYKYPEHIVVIEKL
PRTASGKIQKFLLRKDIMRRLTQDVCEEIE

Sequences:

>Translated_110_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLEEVVAFFSRKRVAKYKYPEHIVVIEKL
PRTASGKIQKFLLRKDIMRRLTQDVCEEIE
>Mature_110_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLEEVVAFFSRKRVAKYKYPEHIVVIEKL
PRTASGKIQKFLLRKDIMRRLTQDVCEEIE

Specific function: Catalyzes the esterification, concomitant with transport, of exogenous fatty acids into metabolically active CoA thioesters for subsequent degradation or incorporation into phospholipids. It has a low activity on medium or long chain fatty acids and is ma

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: Membrane; Peripheral membrane protein. Note=Partially membrane-associated [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

Organism=Escherichia coli, GI145693145, Length=73, Percent_Identity=83.5616438356164, Blast_Score=122, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: NA

Molecular weight: Translated: 12402; Mature: 12402

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLEEVVAFF
CCCEEEEECCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHH
SRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRKDIMRRLTQDVCEEIE
HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYLEEVVAFF
CCCEEEEECCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHH
SRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRKDIMRRLTQDVCEEIE
HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 7984428; 12535077 [H]