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The map label for this gene is ydiV

Identifier: 82543925

GI number: 82543925

Start: 1396270

End: 1396983

Strand: Direct

Name: ydiV

Synonym: SBO_1421

Alternate gene names: 82543925

Gene position: 1396270-1396983 (Clockwise)

Preceding gene: 82543924

Following gene: 82543926

Centisome position: 30.89

GC content: 42.44

Gene sequence:

>714_bases
ATGAAGATTTTTTTGGAGAATCTTTATCATTCTGATTGCTATTTCCTGCCGATAAGAGATAACCAGCAAGTCCTTGTCGG
CGTTGAGTTAATTACCCATTTCTCCAGTGAAGATGGCACGGTGCGTATCCCGACGAGTCGGGTTATAGCGCAACTTACCG
AGGAGCAACATTGGCAATTATTTTCAGAGCAGTTGGAATTACTAAAATCATGCCAACATTTTTTTATTCAACATAAACTC
TTTGCCTGGCTTAATTTAACGCCACAAGTGGCTACATTATTATTAGAGAGGGATAATTACGCAGGCGAACTATTAAAATA
TCCGTTTATTGAACTGTTGATTAATGAGAATTACCCGCATCTCAATGAAGGAAAAGATAATCGCGGTCTTTTATCCTTAT
CGCAAGTGTATCCCCTTGTGTTAGGTAATTTGGGAGCAGGCAATAGCACAATGAAAGCGGTTTTTGATGGTCTTTTCACC
CGCGTCATGCTGGATAAAAGTTTTATTCAGCAACAAATCACGCACCGCTCCTTCGAACCGTTTATTCGTGCGATCCAGGC
GCAAATTTCCCCTTGTTGCAATTGCATCATTGCGGGAGGCATTGATACGGCAGAAATATTGGCACAGATTACCCCCTTCG
ATTTCCATGCTCTCCAGGGATGCCTGTGGCCTGCCGTTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAA

Upstream 100 bases:

>100_bases
TGGAACAAATGAAAGTTACTCCTTCTGTAATTGTTATGTCTTATGGCCTCATCCCTTTTAGCCGGATACTGAAAAACATC
CTTCGAGAGGGACGGTTACC

Downstream 100 bases:

>100_bases
CCCTTCTGTTTGCTGGTGTTTAAGACGAGAGTAACCGTCTACACTATCAAACAGGAGGATCTATGACCCTGTCTTTTGTT
ACCCGCTGGCGCGATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR

Sequences:

>Translated_237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
>Mature_237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain

Homologues:

Organism=Escherichia coli, GI1788000, Length=237, Percent_Identity=100, Blast_Score=490, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDIV_ECOLI (P76204)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   C64929
- RefSeq:   AP_002327.1
- RefSeq:   NP_416222.1
- ProteinModelPortal:   P76204
- DIP:   DIP-11763N
- STRING:   P76204
- EnsemblBacteria:   EBESCT00000003142
- EnsemblBacteria:   EBESCT00000018329
- GeneID:   946217
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1697
- KEGG:   eco:b1707
- EchoBASE:   EB3738
- EcoGene:   EG13981
- eggNOG:   COG2200
- GeneTree:   EBGT00050000008784
- HOGENOM:   HBG677266
- OMA:   LWLDNFG
- ProtClustDB:   CLSK880169
- BioCyc:   EcoCyc:G6925-MONOMER
- Genevestigator:   P76204
- InterPro:   IPR001633

Pfam domain/function: PF00563 EAL

EC number: NA

Molecular weight: Translated: 27047; Mature: 27047

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL
CEEEHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPH
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCC
LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP
CCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
HHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL
CEEEHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPH
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCC
LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP
CCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
HHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503