Click here to switch to the map view.

The map label for this gene is 82543900

Identifier: 82543900

GI number: 82543900

Start: 1375999

End: 1376895

Strand: Reverse

Name: 82543900

Synonym: SBO_1396

Alternate gene names: NA

Gene position: 1376895-1375999 (Counterclockwise)

Preceding gene: 82543901

Following gene: 82543899

Centisome position: 30.46

GC content: 58.64

Gene sequence:

>897_bases
ATGCCTGCCGTTGACCTTTCACAGTTACCGGAACCCGCCATCATCGCGGAGCCTGACTTTGAGGCAATTCTGGCTGACAC
AAAGGCCATGATGATTGCGTCCTATCCCGCCGAACAGCGTGAAGCCGTTTCCGCCGCGCTGGAGCTGGAATCGGAACCCC
TTAACGTTATCGCTCAAACCATGTCGTTTCGTGAAATGCTGTTACGCCAGCGGGTCAATGAGGGTGCACGCGCCTGCATG
CTAAGCCACAGCGCCGGGACAGACCTGGACAACCTCGCGGGCAATATGAACACAAAGCGCCTGGTTATCACTCCGGCAAC
GGATACCACCGATGCAGTGATGGAAAGTGACACCTCGCTGAGACTACGGGCGCAACGGGCATATGACGGTCTGAGTGTTG
CTGGCCCGTCAGGTGCATACGAGTATTTTGCACGCAGCGCCAGCGGTCTGGTACGCGATGCGCGGGCCATCAGCCCGTCT
CCGGCCAACGTGACGGTTTCCATCCTGTCCACTGAGGGCGACGGCACAGCAACGGAGGCGTTGCTTAATACCGTTCGCGC
CGTTCTGAATGCAGAGGATACCCGCCCGGTGGCCGACCGCCTGACCGTACAGAGTGCCAGAATCGTGACATGGCGGCTGA
ATGCAAAACTGTACTTTTACCCCGGCCCGGAATCCGAACCTATTCTGGCCGCGGCTGAATCGTCGTTCAGGAAGTGGCTG
GCTGAGCAGGGGCTTATCGGTCAGGACGTGGCGTTGTCCGCCATTGCTGCCGCACTGCATGTGCACGGTGTGCAACGCGT
GGAGATAATCGAACCCACACAGAATATGGCCATCAGCGACATACAGGCGGCGCGCTGTGAGTCATTCACCATCAGCGAAG
GTGGACGCAATGAGTAA

Upstream 100 bases:

>100_bases
TGTCTGGAAGGCAGGAGGCCGCGCCGGGGTGACGCTGTCGGGCACTGTCATGCAGACCATGCAGAATGTTGAATTAACCA
TCACGCTGAGGGAGTAAATC

Downstream 100 bases:

>100_bases
TTCGTTGTTACCACCATCAGCCAGCAATTTCATGCGTTGTGCCGAAGCCGTCGGAACACGCATTACAGACATTCCGGTAG
ACCTCAACACGCTGTGGTCG

Product: phage baseplate assembly protein

Products: NA

Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQTMSFREMLLRQRVNEGARACM
LSHSAGTDLDNLAGNMNTKRLVITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLYFYPGPESEPILAAAESSFRKWL
AEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE

Sequences:

>Translated_298_residues
MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQTMSFREMLLRQRVNEGARACM
LSHSAGTDLDNLAGNMNTKRLVITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLYFYPGPESEPILAAAESSFRKWL
AEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE
>Mature_297_residues
PAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQTMSFREMLLRQRVNEGARACML
SHSAGTDLDNLAGNMNTKRLVITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPSP
ANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLYFYPGPESEPILAAAESSFRKWLA
EQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE

Specific function: Unknown

COG id: COG3948

COG function: function code R; Phage-related baseplate assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31989; Mature: 31858

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQT
CCCCCHHHCCCCCEEECCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH
MSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLVITPATDTTDAVMESDTSL
HHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCE
RLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPSPANVTVSILSTEGDGTATEA
EEEEHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHH
LLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLYFYPGPESEPILAAAESSFRKWL
HHHHHHHHHCCCCCCCHHHHHEECCCEEEEEEECEEEEEECCCCCCCEEHHHHHHHHHHH
AEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE
HHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure 
PAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVSAALELESEPLNVIAQT
CCCCHHHCCCCCEEECCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH
MSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLVITPATDTTDAVMESDTSL
HHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCE
RLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPSPANVTVSILSTEGDGTATEA
EEEEHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHH
LLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLYFYPGPESEPILAAAESSFRKWL
HHHHHHHHHCCCCCCCHHHHHEECCCEEEEEEECEEEEEECCCCCCCEEHHHHHHHHHHH
AEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNMAISDIQAARCESFTISEGGRNE
HHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA