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The map label for this gene is ydiY [H]

Identifier: 82543873

GI number: 82543873

Start: 1345869

End: 1346627

Strand: Direct

Name: ydiY [H]

Synonym: SBO_1368

Alternate gene names: 82543873

Gene position: 1345869-1346627 (Clockwise)

Preceding gene: 82543869

Following gene: 82543876

Centisome position: 29.78

GC content: 49.14

Gene sequence:

>759_bases
ATGAAGCTTTTGAAGACAGTTCCTGCCATCGTTATGTTGGCGGGGGGCATGTTTGCGTCACTGAATGCAGCTGCCGATGA
TTCCGTTTTTACTGTCATGGACGATCCTGCCAGCGCTAAAAAACCTTTCGAAGGTAATCTGAACGCAGGATATCTTGCAC
AATCAGGCAATACGAAAAGCTCCTCACTTACGGCTGACACCACCATGACCTGGTATGGACAAACCACTGCCTGGTCGCTG
TGGGGGAACGCCAGTAATACTTCTTCTAATGATGAGCGTTCTTCAGAAAAATATGCGGCGGGCGGGCGTAGCCGCTTTAA
TTTAACTGATTATGACTATTTATTTGGTCAGGCAAGCTGGCTGACAGACCGTTATAACGGCTATCGAGAGCGCGATGTGT
TGACCGCGGGTTATGGTCGTCAGTTTTTGAATGGCCCGGTACACAGTTTCCGCTTTGAATTCGGTCCAGGTGTGCGTTAC
GACAAATATACCGACAATGCCAGTGAAACTCAGCCGCTGGGCTATGCCTCCGGGGCTTATGCATGGCAGTTGACTGACAA
CGCTAAATTTACGCAGGGTGTTTCGGTCTTTGGCGCGGAAGACACAACGCTGAACTCCGAAAGCGCATTAAATGTTGCTA
TTAATGAACATTTTGGACTGAAGGTGACTTACAACGTTACATGGAACTCTGAACCTCCAGAGTCTGCACCGGAACATACC
GACCGTCGGACAACCTTATCGCTGGGCTACAGCATGTAA

Upstream 100 bases:

>100_bases
TTTATAATTCGTTACCTTTCCAGGGACGCTAATCTTTGATCCTTAAGAAAGTTTCCGGGACCGCGATGGTCTCTTTTTTT
GTTGTACGGACTCTTGATAA

Downstream 100 bases:

>100_bases
AATTATCTGCCGGACCGTGTTATGCGGTCTGGCTGTCTTCGTTTGTCACTGCTCAGCCCCAAATCATTGCTGCCCAACGT
AGCAACAACATAGCGCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVTYNVTWNSEPPESAPEHT
DRRTTLSLGYSM

Sequences:

>Translated_252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVTYNVTWNSEPPESAPEHT
DRRTTLSLGYSM
>Mature_252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVTYNVTWNSEPPESAPEHT
DRRTTLSLGYSM

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=99.2063492063492, Blast_Score=514, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27628; Mature: 27628

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
CEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVTYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTLSLGYSM
CCCEEEEECCCC
>Mature Secondary Structure
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
CEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVTYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTLSLGYSM
CCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]