| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ves [H]
Identifier: 82543855
GI number: 82543855
Start: 1331801
End: 1332439
Strand: Direct
Name: ves [H]
Synonym: SBO_1348
Alternate gene names: 82543855
Gene position: 1331801-1332439 (Clockwise)
Preceding gene: 82543854
Following gene: 82543858
Centisome position: 29.47
GC content: 51.33
Gene sequence:
>639_bases TTGCCGATAACCATCCACGGTTACCTGAACGATAACAATGAAAAGAACGGGCCGGGAGCGAGTATGGAATACTTTGATAT GCGTAAAATGTCGGTGAATCTGTGGCGAAATGCTGCCGGTGAAACGCGCGAAATTTGCACTTTCCCACCGGCAAAACGTG ATTTTTACTGGCGTGCCAGCATTGCATCCATCGCGGCGAATGGGGAGTTTTCTTTGTTTCCCGGCATGGAAAGGATAGTG ACGTTGCTGGAAGGCGGCGAGATGCTCCTTGAAAGCGCAGACCGCTTTAACCATACCTTAAAACCGTTACAGCCTTTTGC CTTTGCAGCGGACCAGGTGGTAAAAGCGAAACTGACGGAAGGGCAGATGTCGATGGATTTCAACATCATGACACGCCTGG ATGTCTGTAAGGCGAAAGTCAGAATTGCCGAACGTACGTTTACTACCTTTGGCTCACGCGGCGGGGTGGTGTTTGTGATT AACGGGGCGTGGCAACTGGGCGATAAATTGCTCACTACCGACCAGGGCGCGTGCTGGTTCGATGGCAGGCACACCCTGCG GCTTTTACAACCGCAAGGTAAACTGTTGTTCAGTGAAATCAACTGGCTCGCTGGTCATTCGCCGGATCAAGTTCAGTAA
Upstream 100 bases:
>100_bases CTACCTTGCAGTAATGCGGTGGACAGGATCGGCGGTTTTCTTTTCTCTTCTCAAACAGTTGTAAAAAAAGCCTGATCACC ACTAACGTAAATCACCCGAG
Downstream 100 bases:
>100_bases TTTCATAGTTACCGGAAAGCAGCGGCTTACAAAGAATTTTATAACCGTCGTGATCAAACCCGGCGGGTGTCCGAATTAAC GTTGTCGCGTCTTCCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPITIHGYLNDNNEKNGPGASMEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIV TLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVI NGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ
Sequences:
>Translated_212_residues MPITIHGYLNDNNEKNGPGASMEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIV TLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVI NGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ >Mature_211_residues PITIHGYLNDNNEKNGPGASMEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVT LLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVIN GAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ves family [H]
Homologues:
Organism=Escherichia coli, GI87081963, Length=191, Percent_Identity=98.9528795811518, Blast_Score=395, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR010282 [H]
Pfam domain/function: PF05962 HutD [H]
EC number: NA
Molecular weight: Translated: 23826; Mature: 23694
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITIHGYLNDNNEKNGPGASMEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRAS CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEH IASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTE HHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC GQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWF CCEEECEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCEEEECCCCCEEE DGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ CCCCEEEEECCCCCEEEEHHHHHCCCCCCCCC >Mature Secondary Structure PITIHGYLNDNNEKNGPGASMEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRAS CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEH IASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTE HHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC GQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWF CCEEECEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCEEEECCCCCEEE DGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ CCCCEEEEECCCCCEEEEHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA