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The map label for this gene is cstC [H]

Identifier: 82543849

GI number: 82543849

Start: 1324834

End: 1326054

Strand: Direct

Name: cstC [H]

Synonym: SBO_1342

Alternate gene names: 82543849

Gene position: 1324834-1326054 (Clockwise)

Preceding gene: 82543839

Following gene: 82543850

Centisome position: 29.31

GC content: 54.63

Gene sequence:

>1221_bases
ATGTCTCAGCCAATTACGCGTGAAAACTTTGATGAATGGATGATACCTGTTTACGCTCCGGCACCCTTTATACCGGTACG
TGGCGAAGGTTCGCGCTTGTGGGATCAGCAGGGGAAAGAGTATATCGACTTCGCGGGTGGCATTGCGGTGAACGCGCTGG
GCCATGCGCATCCGGAACTGCGTGAAGCGCTGAACGAACAGGCGAGTAAGTTCTGGCATACCGGCAACGGTTACACCAAC
GAGCCGGTACTGCGACTGGCGAAAAAATTGATCGACGCCACGTTTGCCGATCGCGTCTTCTTTTGTAACTCCGGTGCGGA
AGCCAACGAAGCGGCGCTAAAACTGGCGCGTAAATTCGCTCACGACCGCTACGGCAGCCATAAGAGCGGTATCATGGCGT
TTAAAAATGCGTTTCATGGTCGCACGCTGTTTACTGTCAGTGCGGGTGGGCAGCCAGCCTATTCACAGGATTTTGCGCCA
CTGCCACCAGATATCCGTCATGCTGCATATAACGATATTAACTCTGCCAGCGCGCTGATTGACGACGCCACCTGTGCGGT
GATTGTCGAACCCATCCAGGGGGAAGGCGGTGTGGTGCCAGCCAGCAACGCGTTTTTACAAGGTCTGCGTGAATTGTGTG
ACCGCCACAATGCGCTGTTGATTTTTGATGAAGTACAAACCGGCGTCGGGCGCACCGGGGAACTGTATGCCTATATGCAC
TACGGCGTGACACCTGATCTGTTAACTACCGCCAAAGCGCTGGGCGGCGATTTCCCGGTCGGTGCGTTGTTAACAACCGA
AGAGTGCGCCAGCGTGATGACCGTTGGCACTCATGGCACCACCTATGGCGGCAATCCGCTGGCCTCGGCGGTGGCGGGCA
AAGTGCTGGAGCTCATCAACACACCAGAGATGCTTAATGGCGTTAAACAGCGTCACGACTGGTTTGTTGAGCGTCTTAAT
ACCATTAATCACCGCTACGGTTTGTTCAGTGAAGTTCGCGGCTTAGGTTTGTTGATTGGCTGTGTACTGAATGCCGATTA
CGCCGGACAAGCGAAACAGATCTCTCAGGAGGCGGCGAAAGCAGGCGTTATGGTACTGATTGCGGGTGGCAACGTGGTGC
GTTTTGCGCCTGCGCTCAATGTCAGCGAAGAAGAGGTGACGACCGGACTGGATCGCTTTGCAGCTGCTTGCGAACATTTT
GTTAGCCGAGGTTCATCATGA

Upstream 100 bases:

>100_bases
TTTATCACTGGCTGGCACGAACCCTGCAATCTACATTTACAGCGCAAACATTACTTATTGTTAACATATAAATAACGAAT
TATTTACTGTAGAGGTCGCT

Downstream 100 bases:

>100_bases
TGGTCATCCGTCCCGTTGAGCGCTCAGATGTCTCGGCGCTGATGCAGCTTGCCAGCAAAACGGGCGGCGGCCTGACGTCG
CTTCCCGCTAATGAAGCCAC

Product: bifunctional succinylornithine transaminase/acetylornithine transaminase

Products: NA

Alternate protein names: Succinylornithine aminotransferase [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTN
EPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMH
YGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLN
TINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHF
VSRGSS

Sequences:

>Translated_406_residues
MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTN
EPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMH
YGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLN
TINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHF
VSRGSS
>Mature_405_residues
SQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNE
PVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAPL
PPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHY
GVTPDLLTTAKALGGDFPVGALLTTEECASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNT
INHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFV
SRGSS

Specific function: Catalyzes the transamination of N(2)-succinylornithine and alpha-ketoglutarate into N(2)-succinylglutamate semialdehyde and glutamate. Can also act as an acetylornithine aminotransferase [H]

COG id: COG4992

COG function: function code E; Ornithine/acetylornithine aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. AstC subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557809, Length=379, Percent_Identity=34.8284960422164, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI284507298, Length=293, Percent_Identity=35.4948805460751, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI13994255, Length=443, Percent_Identity=27.765237020316, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI37574042, Length=422, Percent_Identity=28.1990521327014, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226442705, Length=422, Percent_Identity=27.4881516587678, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI226442709, Length=387, Percent_Identity=28.4237726098191, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI24119277, Length=412, Percent_Identity=26.6990291262136, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI188536080, Length=426, Percent_Identity=23.7089201877934, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI38679950, Length=426, Percent_Identity=23.7089201877934, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI38679946, Length=426, Percent_Identity=23.7089201877934, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1788044, Length=406, Percent_Identity=98.2758620689655, Blast_Score=826, Evalue=0.0,
Organism=Escherichia coli, GI1789759, Length=397, Percent_Identity=60.4534005037783, Blast_Score=510, Evalue=1e-146,
Organism=Escherichia coli, GI1789016, Length=398, Percent_Identity=34.4221105527638, Blast_Score=208, Evalue=4e-55,
Organism=Escherichia coli, GI145693181, Length=374, Percent_Identity=34.7593582887701, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1787560, Length=390, Percent_Identity=34.6153846153846, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI1786349, Length=312, Percent_Identity=32.6923076923077, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1786991, Length=296, Percent_Identity=32.7702702702703, Blast_Score=129, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25144271, Length=391, Percent_Identity=35.0383631713555, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI32564660, Length=434, Percent_Identity=30.184331797235, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI25144274, Length=287, Percent_Identity=33.4494773519164, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71992977, Length=433, Percent_Identity=28.6374133949192, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17541228, Length=308, Percent_Identity=26.9480519480519, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71981843, Length=165, Percent_Identity=33.9393939393939, Blast_Score=96, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6324432, Length=402, Percent_Identity=39.5522388059701, Blast_Score=286, Evalue=6e-78,
Organism=Saccharomyces cerevisiae, GI6323470, Length=400, Percent_Identity=33.5, Blast_Score=216, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6324386, Length=325, Percent_Identity=28.6153846153846, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6321456, Length=423, Percent_Identity=24.5862884160757, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21357415, Length=379, Percent_Identity=35.8839050131926, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI161085790, Length=452, Percent_Identity=29.2035398230088, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI28574759, Length=445, Percent_Identity=29.2134831460674, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI21356575, Length=361, Percent_Identity=29.3628808864266, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI281366494, Length=430, Percent_Identity=24.4186046511628, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24667139, Length=430, Percent_Identity=24.4186046511628, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24667143, Length=430, Percent_Identity=24.4186046511628, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004636
- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR017652 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.81 [H]

Molecular weight: Translated: 43728; Mature: 43597

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPEL
CCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCHHH
REALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFA
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH
HDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYNDINSASALI
HHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
DDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMH
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCEEEEEE
YGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVGTHGTTYGGNPLASAVAGKVLELIN
CCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHC
TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS
CCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPEL
CCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCHHH
REALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFA
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH
HDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYNDINSASALI
HHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
DDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMH
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCEEEEEE
YGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVGTHGTTYGGNPLASAVAGKVLELIN
CCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHC
TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS
CCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA