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The map label for this gene is ydjY [H]

Identifier: 82543845

GI number: 82543845

Start: 1321405

End: 1321986

Strand: Reverse

Name: ydjY [H]

Synonym: SBO_1338

Alternate gene names: 82543845

Gene position: 1321986-1321405 (Counterclockwise)

Preceding gene: 82543846

Following gene: 82543844

Centisome position: 29.25

GC content: 48.8

Gene sequence:

>582_bases
ATGTGGATCTGTCTGCTTCGCGCCGCAGCCCGCTTACTCACCCAAAAAATGAAGGATAGAACGATGTCGCAACATTATTC
AGTGTCATGGAAAAAAGGACTGGCTGCACTCTGCTTACTGGCTGTTGCCGGGCTTAGCGGCTGCGATCAAAAAGAGAATT
CGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGCGTCGATGCCAATAACCATACGGTAACCATG
CTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGATGGCTCCAACGGACATAA
ATCGCTGTTTATGGCTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGGTACGCCGGGCGAAAACA
TGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGATATTTCGGTCAACTGGCAAGGGGCGGCAAAA
GCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGCGGTAATTTAACGGCAGC
AGAAGAGAAGAAAACGGGTTGA

Upstream 100 bases:

>100_bases
TGGAGTCATTACCCGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAA
ACTCTACGCCCGACACAAAC

Downstream 100 bases:

>100_bases
CTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAATGCAACATACACTTATGGTGCGGTGGAAAAACGCGGCGA
AGTGAAATTCAAAGGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MWICLLRAAARLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENSAAKVEYDGLSNSQPLRVDANNHTVTM
LVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAK
AYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTG

Sequences:

>Translated_193_residues
MWICLLRAAARLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENSAAKVEYDGLSNSQPLRVDANNHTVTM
LVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAK
AYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTG
>Mature_193_residues
MWICLLRAAARLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENSAAKVEYDGLSNSQPLRVDANNHTVTM
LVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAK
AYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=172, Percent_Identity=97.6744186046512, Blast_Score=322, Evalue=8e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21083; Mature: 21083

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWICLLRAAARLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENSAAKVEY
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
DGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFY
CCCCCCCCEEEECCCCEEEEEEEECCEEECCCCCCCEEEECCCCCCCEEEEEEECHHHHH
EALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRF
HHHHHCCCCCCCCCEECCCCCEEECCCEEEEEEECCCCCCEECCCEEEECCCCCEEEEEE
GGNLTAAEEKKTG
CCCEEECCCCCCC
>Mature Secondary Structure
MWICLLRAAARLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENSAAKVEY
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
DGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFY
CCCCCCCCEEEECCCCEEEEEEEECCEEECCCCCCCEEEECCCCCCCEEEEEEECHHHHH
EALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRF
HHHHHCCCCCCCCCEECCCCCEEECCCEEEEEEECCCCCCEECCCEEEECCCCCEEEEEE
GGNLTAAEEKKTG
CCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]