| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ansA [H]
Identifier: 82543828
GI number: 82543828
Start: 1303836
End: 1304852
Strand: Reverse
Name: ansA [H]
Synonym: SBO_1320
Alternate gene names: 82543828
Gene position: 1304852-1303836 (Counterclockwise)
Preceding gene: 82543829
Following gene: 161984949
Centisome position: 28.87
GC content: 50.74
Gene sequence:
>1017_bases ATGCAAAAGAAATCAATTTACGTCGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATTCCGGT GTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAAT ATACGCCGTTGATGGATTCTTCTGATATGACGCCGGATGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGAC GACTATGATGGTTTTGTCATTCTACACGGTACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAA TCTCGGTAAACCGGTCATTGTGACAGGGTCACAAATCCCGCTGGCTGAGTTACGCTCTGACGGACAAATTAATCTGCTGA ATGCGTTGTACGTTGCGGCGAATTATCCGATCAACGAAGTAACGCTCTTTTTCAATAACCGATTGTATCGCGGCAACCGC ACTACCAAAGCCCATGCCGATGGTTTTGATGCGTTTGTCTCTCCAAACCTTCCTCCGTTACTGGAAGCTGGTATCCATAT TCGTCGTTTGAATACGCCACCCGCCCCGCACGGTGAAGGGGAATTAATCGTTCATCCAATCACGCCACAACCAATTGGCG TAGTGACGATTTATCCGGGGATTTCTGCTGATGTCGTGCGCAATTTTCTGCGCCAACCAGTGAAAGCATTGATTCTGCGC TCCTATGGCGTGGGTAATGCGCCACAAAACAAAGCCTTCCTGCAGGAATTACAAGAAGCCAGCGATCGCGGTATTGTGGT GGTCAACCTGACACAATGTATGTCCGGTAAAGTGAATATGGGTGGTTATGCCACCGGTAACGCCCTCGCCCATGCCGGCG TTATTGGCGGTGCAGATATGACTGTAGAAGCCACGCTAACCAAACTGCATTACCTGCTGAGCCAGGAACTGGATACTGAA ACCATTCGCAAGGCCATGAGCCAAAACCTGCGCGGCGAACTGACGCCGGATGATTAA
Upstream 100 bases:
>100_bases GCTGTCTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCTCCTGCCTCACGTATATACTTTTGCTCTTTCG ATATCATTCATATCAATATC
Downstream 100 bases:
>100_bases GGAGACTGCAATGCCCCATCGCGCCCTGTTACTGGTCGATTTACAAAATGATTTCTGTGCTGGTGGCGCGCTCGCCGTAC CGGAAGGTGACAGTACGGTG
Product: cytoplasmic asparaginase I
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYD DYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR TTKAHADGFDAFVSPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTE TIRKAMSQNLRGELTPDD
Sequences:
>Translated_338_residues MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYD DYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR TTKAHADGFDAFVSPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTE TIRKAMSQNLRGELTPDD >Mature_338_residues MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYD DYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR TTKAHADGFDAFVSPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTE TIRKAMSQNLRGELTPDD
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=363, Percent_Identity=45.1790633608815, Blast_Score=279, Evalue=3e-75, Organism=Escherichia coli, GI1788065, Length=338, Percent_Identity=99.4082840236686, Blast_Score=696, Evalue=0.0, Organism=Escherichia coli, GI1789327, Length=282, Percent_Identity=28.0141843971631, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193207372, Length=361, Percent_Identity=45.1523545706371, Blast_Score=293, Evalue=7e-80, Organism=Caenorhabditis elegans, GI193207374, Length=361, Percent_Identity=45.1523545706371, Blast_Score=293, Evalue=7e-80, Organism=Caenorhabditis elegans, GI17558280, Length=358, Percent_Identity=45.5307262569832, Blast_Score=293, Evalue=7e-80, Organism=Caenorhabditis elegans, GI17558278, Length=358, Percent_Identity=45.5307262569832, Blast_Score=293, Evalue=8e-80, Organism=Saccharomyces cerevisiae, GI6320527, Length=175, Percent_Identity=29.1428571428571, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639609, Length=366, Percent_Identity=44.2622950819672, Blast_Score=287, Evalue=7e-78, Organism=Drosophila melanogaster, GI24645530, Length=362, Percent_Identity=43.646408839779, Blast_Score=279, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 37142; Mature: 37142
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDS CCCCEEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCC SDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIP CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCC LAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFVSPNLPPL HHHHCCCCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCHH LEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR HHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADM HCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEECCCHHHHCCEECCCCE TVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD EHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDS CCCCEEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCC SDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIP CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCC LAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFVSPNLPPL HHHHCCCCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCHH LEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR HHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADM HCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEECCCHHHHCCEECCCCE TVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD EHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]