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The map label for this gene is yeaB [H]

Identifier: 82543780

GI number: 82543780

Start: 1263286

End: 1263864

Strand: Reverse

Name: yeaB [H]

Synonym: SBO_1271

Alternate gene names: 82543780

Gene position: 1263864-1263286 (Counterclockwise)

Preceding gene: 82543781

Following gene: 82543779

Centisome position: 27.96

GC content: 54.23

Gene sequence:

>579_bases
GTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCTCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCT
AAATCATCGTCAGGCTGCCGTGTTAATCCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCAATTC
ATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGTTATCGCCGCCGCG
CTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCGATAGCGT
AACTGGCTATCAGGTAACCCCAGTGATCGGCATTATCCCGCCCGATCTGCCGTATCGCGCCAGTGAAGATGAAGTCTCGG
CGGTGTTTGAAATGCCGCTCGCCCAGGCATTACATCTGGGTCGTTATCACCCTTTAGATATCTACCGCCGTGGCGATTCA
CATCGGGTATGGCTGTCCTGGTACGAACAGTATTTTGTATGGGGAATGACCGCAGGCATAATTCGTGAGCTGGCGCTGCA
AATTGGTGTGAAACCCTGA

Upstream 100 bases:

>100_bases
TGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTACTAAGATATTAC
GCCAACTGGAGAAGTAAGAC

Downstream 100 bases:

>100_bases
CTATACTTATCTTTACATCTACAAAACACTACTTGAGACAATCATCGCAATATTAGTTAAATCGCGGTTTTTGATTAGTT
TAATTCATGTGAATAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP

Sequences:

>Translated_192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP
>Mature_192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=186, Percent_Identity=34.9462365591398, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=98.9583333333333, Blast_Score=384, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17536993, Length=117, Percent_Identity=38.4615384615385, Blast_Score=73, Evalue=7e-14,
Organism=Drosophila melanogaster, GI18859683, Length=167, Percent_Identity=34.1317365269461, Blast_Score=80, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21478; Mature: 21478

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCEEECCEEEECC
PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC
>Mature Secondary Structure
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCEEECCEEEECC
PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA