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The map label for this gene is 82543732

Identifier: 82543732

GI number: 82543732

Start: 1219168

End: 1219650

Strand: Reverse

Name: 82543732

Synonym: SBO_1222

Alternate gene names: NA

Gene position: 1219650-1219168 (Counterclockwise)

Preceding gene: 82543733

Following gene: 82543730

Centisome position: 26.98

GC content: 56.52

Gene sequence:

>483_bases
ATGGCAGCGGCGCTGGAACTCTCAAGGCTGATGGGATTACGTTCGCAGGAGGTGGTGCAAAGTGCGCAGTCATTAAGAAC
GTGGAAGCAATCGCTGGAGCGGGGTGAGCCCCGTTTAACCGTGGTGTTCGGCACCAAAGGCGGGCGTCCGCGAGAAACCG
TTATTCTGGATGCTGTCGCTATCAGAAAAGCGCTGGATAATGCGTTGGTTGTGGCAGAAGATCGCCACGGCAGGCTGATA
GATAAACCCGACCTGAAAAGCGCGATGAAATACTGGCACAGCCAGGCGTCACGTCTCGGGTTAACTGGCACATATTCCCC
GCACTCGTTGCGCTATGCGTGGGCGCAGGATGCCATTCGTCATTATCTGGCGCAGGGATTCAGTGAGAAAGAAGCGCTGG
CAATGACGGCGATGGATTTGGGACACGGCGACGGGCGCGGGCGGTATGTGGCGCAGGTTTACGGAAGAAAGGATACTGAT
TGA

Upstream 100 bases:

>100_bases
AGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGAGTTCACAGATAAAACACTCTCCAGG
AAACCCGGGGCGGTTCAGGG

Downstream 100 bases:

>100_bases
TAGCCGTTGCTTTGAAAAGATCGAGTTATCCATCGGTTTTCGGGCAAAATTATTTGCCCCAAATAATTTTGGATGGTTTC
CTATTAATTTCGCGTTATTC

Product: integrase

Products: NA

Alternate protein names: Phage Integrase

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFGTKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLI
DKPDLKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD

Sequences:

>Translated_160_residues
MAAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFGTKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLI
DKPDLKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD
>Mature_159_residues
AAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFGTKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLID
KPDLKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17825; Mature: 17693

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFGTKGGRPRETVILDAVA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH
IRKALDNALVVAEDRHGRLIDKPDLKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIR
HHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD
HHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
AAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFGTKGGRPRETVILDAVA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH
IRKALDNALVVAEDRHGRLIDKPDLKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIR
HHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD
HHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA