| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543716
Identifier: 82543716
GI number: 82543716
Start: 1196089
End: 1196907
Strand: Reverse
Name: 82543716
Synonym: SBO_1200
Alternate gene names: NA
Gene position: 1196907-1196089 (Counterclockwise)
Preceding gene: 82543717
Following gene: 82543715
Centisome position: 26.48
GC content: 57.14
Gene sequence:
>819_bases GTGAACTGCGCAGGAATGTCGGCAATTTTGGCGGTTTCCTTTCCATTAATAAACTTTCGCAGTAAATCCCGATTTATGAC ACAGACTGAATCAGCGATTCTGGCGCATGCCCGGCGGTGTGCGCCTGCGGAGTCGTGCGGCTTCGTGATAAGCACGCCGG AGGGGGAGCGGTATATCCCTTGTGTGAATATTTCTGCAGAGCCGGAGGCGTATTTTCGTATCGCACCGGAAGACTGGCTG CGGGCAGAGATGCAGGGGGAGATTGTGGCACTGGTCCACAGTCATCCCGGTGAGCTGCCCTGGCTGAGCGAGGCTGACCG GCGGCTGCAGATAAAAAGCGCACTGCCCTGGTGGCTGGTCTGCCGGGGGGAAATTCATAAATTCCGCTGTGTGCCACATC TGACAGGACGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGCATACCATCTGGCGGGAATTGAT ATGCCGGATTTTCATCGCGAGGATGACTGGTGGCGCAACGGCCAGAACCTGTACCTGGACAATATGGCGGTCACCGGCTT TTACCGGGTGCCCCTGTCCTCTGCACCGCCGGGCGATATTCTGCTGTGCTGCTTTGGTGCTTCGGTACCGAACCATGCCA CCATTTACTGCGGCAACGGTGAGCTGCTTCACCATCTGCCTGAACAACTGAGTAAACGGGAGAGGTATTCCGAAAAATGG CAACGACGAACGCATTCTGTCTGGCGTCACCGCCACTGGCACGCATCTGCCTTCACGGGGATTTGCAACGATTTGGCCGC CGCCTCAGCCTGTATGTGA
Upstream 100 bases:
>100_bases TCTGATGAGTGTGGTTACACGGGCGGGGCTGTGGCGGATGAGTTCGATAAACCCACCACGGATATCCGTAAGGACAGATG CAGCAAGTGCATGCGCGGGT
Downstream 100 bases:
>100_bases ACACGGCAGCGGAAGCCATTCGCGCCCTGTCGATGCAGATGCCGGGCTTTCGCCGTCAGATGAACGAAGGCTGGTACCAG ATACGTATTGCCGGTGATGA
Product: tail assembly protein
Products: NA
Alternate protein names: Tail Assembly Protein; Tail Assembly Protein K; Phage Minor Tail Protein; Phage Tail Assembly Protein; Prophage LambdaSo Tail Assembly Protein K; Phage Protein; Gifsy-2 Prophage Tail Assembly Protein; Phage-Related Tail Assembly Protein K; Tail Assembly Protein K-Like; Tail Fiber Component; NlpC/P60 Family Protein; Bacteriophage Tail Protein; Tail Fiber Component K Of Prophage; Phage Tail Protein; Metal-Dependent Protease; Tail Fiber Component K
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWL RAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGID MPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKW QRRTHSVWRHRHWHASAFTGICNDLAAASACM
Sequences:
>Translated_272_residues MNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWL RAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGID MPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKW QRRTHSVWRHRHWHASAFTGICNDLAAASACM >Mature_272_residues MNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWL RAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGID MPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKW QRRTHSVWRHRHWHASAFTGICNDLAAASACM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31026; Mature: 31026
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIP CCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEEEE CVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLV EEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE CRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLD EECCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEE NMAVTGFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKW CEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH QRRTHSVWRHRHWHASAFTGICNDLAAASACM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIP CCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEEEE CVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLV EEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE CRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLD EECCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEE NMAVTGFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKW CEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH QRRTHSVWRHRHWHASAFTGICNDLAAASACM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA