| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is insO1 [H]
Identifier: 82543701
GI number: 82543701
Start: 1180742
End: 1181092
Strand: Reverse
Name: insO1 [H]
Synonym: SBO_1185
Alternate gene names: 82543701
Gene position: 1181092-1180742 (Counterclockwise)
Preceding gene: 82543702
Following gene: 82543700
Centisome position: 26.13
GC content: 55.84
Gene sequence:
>351_bases GTGGTCACACTCTGCCAAGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCGTGAAAAACCAGACGG CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCATGGTTCGGCCGGAGCAAGAAGCATCGCCA CAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGT CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGG TGACCGAGCCAAATCAGGTGTGGTGCGGTGA
Upstream 100 bases:
>100_bases TTGAAATGGAGAATGAAATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCATGAACAGTTCTCGATAATCGGGA AACTCAGAGCGCATTATCCT
Downstream 100 bases:
>100_bases TGTGACCTGTATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCT GGGCCATGTCGTTCTCGCCG
Product: IS911 ORF2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR
Sequences:
>Translated_116_residues MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR >Mature_116_residues MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13248; Mature: 13248
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG CCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG CCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]