Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is insO1 [H]

Identifier: 82543701

GI number: 82543701

Start: 1180742

End: 1181092

Strand: Reverse

Name: insO1 [H]

Synonym: SBO_1185

Alternate gene names: 82543701

Gene position: 1181092-1180742 (Counterclockwise)

Preceding gene: 82543702

Following gene: 82543700

Centisome position: 26.13

GC content: 55.84

Gene sequence:

>351_bases
GTGGTCACACTCTGCCAAGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCGTGAAAAACCAGACGG
CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCATGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGT
CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGG
TGACCGAGCCAAATCAGGTGTGGTGCGGTGA

Upstream 100 bases:

>100_bases
TTGAAATGGAGAATGAAATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCATGAACAGTTCTCGATAATCGGGA
AACTCAGAGCGCATTATCCT

Downstream 100 bases:

>100_bases
TGTGACCTGTATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCT
GGGCCATGTCGTTCTCGCCG

Product: IS911 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR

Sequences:

>Translated_116_residues
MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR
>Mature_116_residues
MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13248; Mature: 13248

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVTLCQVFGVHRSSYRYWKNRREKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAGDRAKSGVVR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]