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The map label for this gene is ycgL

Identifier: 82543681

GI number: 82543681

Start: 1165851

End: 1166177

Strand: Direct

Name: ycgL

Synonym: SBO_1165

Alternate gene names: 82543681

Gene position: 1165851-1166177 (Clockwise)

Preceding gene: 82543679

Following gene: 82543682

Centisome position: 25.79

GC content: 42.81

Gene sequence:

>327_bases
ATGCCAAAACCTGGCATCTTAAAGAGTAAAAGTATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTT
ATATGTCGAAAAAAAAGACGATTTTTCGCGTGTTCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGA
TTCTGCCGTTGGATGGGCGGAAGAAACTGGTCAATGCTGATATTGAAAAGGTTAAACTGGCATTAACCGAGCAAGGTTAC
TATTTGCAGTTACCGCCACCACCCGAAGATTTGCTGAAGCAACATCTTTCCGTCATGGGGCAGAAAACAGACGACACGAA
CAAATAA

Upstream 100 bases:

>100_bases
TTTTTGCCGGGGGGATTACTTATAAAGGGGCATGGACTCAACAAACCGCAGAAATCTACAGCTGGCTGGCTTGTGGCGCG
GGTTTCATTGATGTTAGCTT

Downstream 100 bases:

>100_bases
CCGATATCCGGCGGTGGCATTATCTTTGTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAA
CATCACAACTGGCAAGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKVKLALTEQGY
YLQLPPPPEDLLKQHLSVMGQKTDDTNK

Sequences:

>Translated_108_residues
MPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKVKLALTEQGY
YLQLPPPPEDLLKQHLSVMGQKTDDTNK
>Mature_107_residues
PKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKVKLALTEQGYY
LQLPPPPEDLLKQHLSVMGQKTDDTNK

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=97, Percent_Identity=98.9690721649485, Blast_Score=196, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCGL_ECO24 (A7ZKV0)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462429.1
- ProteinModelPortal:   A7ZKV0
- SMR:   A7ZKV0
- STRING:   A7ZKV0
- EnsemblBacteria:   EBESCT00000019617
- GeneID:   5587344
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1323
- eggNOG:   COG3100
- GeneTree:   EBGT00050000009954
- HOGENOM:   HBG754037
- ProtClustDB:   CLSK879992
- BioCyc:   ECOL331111:ECE24377A_1323-MONOMER
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 12400; Mature: 12269

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGR
CCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCC
KKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK
CHHHCCCHHHEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGR
CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCC
KKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK
CHHHCCCHHHEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA