| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yebG [H]
Identifier: 82543672
GI number: 82543672
Start: 1155578
End: 1155838
Strand: Reverse
Name: yebG [H]
Synonym: SBO_1156
Alternate gene names: 82543672
Gene position: 1155838-1155578 (Counterclockwise)
Preceding gene: 82543674
Following gene: 82543671
Centisome position: 25.57
GC content: 48.66
Gene sequence:
>261_bases ATGGCGGTTGAAGTTAAATACGTAGTCATTCGTGAGGGCGAAGAGAAAATGTCGTTTACCAGCAAAAAGGAAGCCGATGC TTATGACAAAATGCTTGATACGGCGGATCTGCTTGACACCTGGCTGACTAATTCTCCAGTGCAAATGGAAGACGAGCAAC GTGAAGCCCTTTCGCTATGGCTGGCAGAACAAAAAGATGTGCTGAGCACCATTCTGAAAACCGGCAAATTACCGTCCCCA CCCACAGGTCGTCGGTGCTGA
Upstream 100 bases:
>100_bases ATAAACGAAAACGTTTGCGTGTGTCTTTATTGTTGATTTTGATTTCTCAACCGAAAAGAAATATACTGTATAAAATCACA GTTATTATGAGAGGCTGCAA
Downstream 100 bases:
>100_bases ATCCGAAGAGGAAGATGCCTCACACGCGGCCTGAAGCAACTTGCGCTCCTGACAATTTGTACCATGCTTTCTCCTGAATC ATTGTGCTATGGAGAAAAAC
Product: DNA damage-inducible protein YebG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSP PTGRRC
Sequences:
>Translated_86_residues MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSP PTGRRC >Mature_85_residues AVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPP TGRRC
Specific function: Unknown
COG id: COG3141
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788153, Length=80, Percent_Identity=100, Blast_Score=162, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009813 [H]
Pfam domain/function: PF07130 YebG [H]
EC number: NA
Molecular weight: Translated: 9777; Mature: 9646
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW CCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAEQKDVLSTILKTGKLPSPPTGRRC HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW CEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAEQKDVLSTILKTGKLPSPPTGRRC HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]