Click here to switch to the map view.

The map label for this gene is fliZ [H]

Identifier: 82543611

GI number: 82543611

Start: 1095394

End: 1095981

Strand: Direct

Name: fliZ [H]

Synonym: SBO_1085

Alternate gene names: 82543611

Gene position: 1095394-1095981 (Clockwise)

Preceding gene: 82543610

Following gene: 82543612

Centisome position: 24.24

GC content: 46.6

Gene sequence:

>588_bases
ATGCCGCACTTTAACTTTGACTACCAGGAGTTCTTAATGATGGTGCAGCACCTGAAAAGACGGCCATTAAGCCGCTATCT
TAAAGACTTTAAACACAGCCAGGCCCATTGCGCGCATTGCCGTAAATTACTCGATCGCATTACCTTAGTTCGCGACGGCA
AAATAGTGAATAAAATCGAGATTTCCCGCCTGGACACGCTGCTTGATGAAAATGGCTGGCAAGTGGAACAACAGTCATGG
GCGGCATTGTGCCGATTTTGCGGTGATTTACATTGCAAAACGCAGAGTGATTTTTTCGATATTATCGGCTTTAAGCAATT
TCTTTTTGAGCAAACTGAAATGAGCCCAGGTACGGTGCGTGAATATGTCGTTCGTTTGCGCCGTTTGGGGAATCATCTAC
ATGAGCAAAATATTTCCCTCGATCAGCTGCAGGACGGTTTCCTTGATGAAATCCTCGCCCCGTGGCTGCCCACCACCAGC
ACCAACAATTACCGCATCGCATTACGGAAGTATCAACACTATCAGCGTCAAACGTGTACCGGACTTGTGCAGAAATCCTC
CAGCCTGCCTGCTTCTGATATATATTAA

Upstream 100 bases:

>100_bases
TGGCGCGGTGCTGGAGGTCGGGGAATCGCGGGTCAGTCAGTTACACAGCCAGGCCATTAAACGGTTAAGCACTAAACTGG
GTAAGTTATAACGTCAGTAA

Downstream 100 bases:

>100_bases
ATAAGAATAAGATGTAGCGGAGTTGTTTTTGTGTTTACAAACAATGGCTCTACACTGCAAACAGACATAACAACATTCGG
GGTGAATATGAAATTAGCAC

Product: flagella biosynthesis protein FliZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQVEQQSW
AALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTS
TNNYRIALRKYQHYQRQTCTGLVQKSSSLPASDIY

Sequences:

>Translated_195_residues
MPHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQVEQQSW
AALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTS
TNNYRIALRKYQHYQRQTCTGLVQKSSSLPASDIY
>Mature_194_residues
PHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQVEQQSWA
ALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTST
NNYRIALRKYQHYQRQTCTGLVQKSSSLPASDIY

Specific function: During the post-exponential growth phase transiently interferes with RpoS (sigma S) activity without affecting expression of RpoS itself. It is probably not an anti-sigma factor as its overexpression is detrimental in rapidly growing cells where there is

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082001, Length=183, Percent_Identity=97.2677595628415, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022523
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N [H]

EC number: NA

Molecular weight: Translated: 23081; Mature: 22950

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIVNKIE
CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
EYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLVQKSSSLPASDIY
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
PHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIVNKIE
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
EYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLVQKSSSLPASDIY
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550423; 9097040; 9278503; 7590326 [H]