| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543566
Identifier: 82543566
GI number: 82543566
Start: 1048023
End: 1048235
Strand: Direct
Name: 82543566
Synonym: SBO_1030
Alternate gene names: NA
Gene position: 1048023-1048235 (Clockwise)
Preceding gene: 82543565
Following gene: 161984954
Centisome position: 23.19
GC content: 46.01
Gene sequence:
>213_bases GTGGCCGGAAGAACCAGACACAATGTAAGCGAAAAAGAAAAACCGCAGACGCGACGTATGCAGGACGTGCTGCGGTTGGC TGGTGAACTTTCGATAGTGCGAGTATTGAATGATTTCCAGCCGTTACCGATTTTATATAACTGCAGTGGAATTATTCAAC ACACAGGCAAAACGGAATATGAAGTGGTCAACAAAAACTGGCCACCGAGTTAG
Upstream 100 bases:
>100_bases TGGAGATCGCAACGGAGGAAGAAAACTCGTTGCTGGAAGCCTAGAAGAAGTATCGGGTGTTGCTGAACCGTGTTGATACA TCAACTGCACCTGATATTGA
Downstream 100 bases:
>100_bases AGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGGAACCCACCGTTATATTCGTGCGGTCTTAGTGCGCTGTAATAT CCAACGATATAGTCCGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAGRTRHNVSEKEKPQTRRMQDVLRLAGELSIVRVLNDFQPLPILYNCSGIIQHTGKTEYEVVNKNWPPS
Sequences:
>Translated_70_residues MAGRTRHNVSEKEKPQTRRMQDVLRLAGELSIVRVLNDFQPLPILYNCSGIIQHTGKTEYEVVNKNWPPS >Mature_69_residues AGRTRHNVSEKEKPQTRRMQDVLRLAGELSIVRVLNDFQPLPILYNCSGIIQHTGKTEYEVVNKNWPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8061; Mature: 7930
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRTRHNVSEKEKPQTRRMQDVLRLAGELSIVRVLNDFQPLPILYNCSGIIQHTGKTEY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCE EVVNKNWPPS EEECCCCCCC >Mature Secondary Structure AGRTRHNVSEKEKPQTRRMQDVLRLAGELSIVRVLNDFQPLPILYNCSGIIQHTGKTEY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCE EVVNKNWPPS EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA