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The map label for this gene is ybcY [H]

Identifier: 82543563

GI number: 82543563

Start: 1046279

End: 1046710

Strand: Reverse

Name: ybcY [H]

Synonym: SBO_1027

Alternate gene names: 82543563

Gene position: 1046710-1046279 (Counterclockwise)

Preceding gene: 82543564

Following gene: 82543562

Centisome position: 23.16

GC content: 40.51

Gene sequence:

>432_bases
ATGGATTTGAACGAAGCTAGCCTGAACGCGGCATCTACAAGGGCTGGGGAATCAAAAATTAAACATAAAATTAGCCATGA
TGTTTTTGAAACTTATCCCGCGGCGTTACATGGTCAATTTGATTCCATTTCCATGTTTTACCTTCTTCACTGCCTGCCTG
GAAATATATCTACAAAAAGCTGTGTAATACGCAATGCGGCGCAGGCCTTAACTGATGATGGAACTCTATACGGAGCCACA
ATTCTTGGCGATGGAGTTGTGCACAATAGCTTCGGTCAAAAACTGATGCGCATTTACAATCAGAAAGGCATCTTTTCAAA
CACAAAAGATTCCGAAGAAGGCTTAACACATATACTCTCAGAGCATTTCGAGAATGTTAAAACCAAGGTTCAAGGTACTG
TAGTAATGTTTTCTGCTTCAGGGAAAAAATAG

Upstream 100 bases:

>100_bases
TCCACACTTTCTGGAACATTTAGGTAACAACCATCTGGATATTGGTGTTGGAACTGGGTTTTACCTTACTCACGTACCTG
AGAGTAGTCTGATATCTTTA

Downstream 100 bases:

>100_bases
CATCCAACCGCAGCACGTTCTTGCTTAAGACGTGCTACGGTTTCCTTTACGATTTGGGGTTGCGACTTTACCTCTATTGA
TAATGCATTCCGGCAGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGAT
ILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK

Sequences:

>Translated_143_residues
MDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGAT
ILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
>Mature_143_residues
MDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGAT
ILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 15594; Mature: 15594

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKS
CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHH
CVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILS
HHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EHFENVKTKVQGTVVMFSASGKK
HHHHHHHHHHCCEEEEEECCCCC
>Mature Secondary Structure
MDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKS
CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHH
CVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILS
HHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EHFENVKTKVQGTVVMFSASGKK
HHHHHHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]