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The map label for this gene is ymfQ [H]

Identifier: 82543503

GI number: 82543503

Start: 989837

End: 990427

Strand: Reverse

Name: ymfQ [H]

Synonym: SBO_0959

Alternate gene names: 82543503

Gene position: 990427-989837 (Counterclockwise)

Preceding gene: 82543506

Following gene: 82543502

Centisome position: 21.91

GC content: 52.79

Gene sequence:

>591_bases
ATGGATTCGTTACAGGATGATTATACAAAGCTGCTGTACGGACTGATGCAGCCGGGGCCTGCATGGTCAGATACCGACGG
TGTACTTGACGGTCTGGCACCATCGCTTGTGCGTGTTCACCAGCGGGCTGATGAACTGGTGATTGAAATCGATCCCGGTC
AGTCCACAGAGCTGATTGAACGTTATGAAGAATTGTATGGTTTACCTGATTCCTGTTCCCCTGTCGGAACCCAGACATTA
CGCCAGCGTCAGCAACGTCTTGAAGCAAAAGCCAATGTGGCTGGTGGCATAAATGAGCAGTTCTTCCTGGATCAGCTTGA
GGCGCTGGGATATACCGGCGTAACGATCGAACAGTTCCAGCACCTGGATGCAAGCCCCGATCCGGAATGGGGAGATCGCT
GGCGTTATTTCTGGCGTGTGACGTTGCCGGTGGATGCCGGTGCTCAGTGGCAGACATGCACGGACGCCTGCAACACACCG
ATCCGGACGTGGGGGGATACGGTTGCGGAGTGCGTGATTAATAAATTATGTCCGTCACACACCGTCGTTTTATTTTCCTA
TCCAGATGAGGATGAAGATGCACAGGATTGA

Upstream 100 bases:

>100_bases
GGTTAATCGTCCCTTCATCGGATATTGACCTGGGGGAGACCGAGCTTCCGGTGCTCGGCGAGATCACCTGGCAGGCTTAT
GACCCGGCAAGGAGTAAATA

Downstream 100 bases:

>100_bases
TACGCTGACTGCGGTAAAAGATAAGTTTGGTCCGGGTAAGAACGGATTTACTGACGGAAATCTTCGCACAGGACGTCTTG
CTACCTGGCTGAACAGTGCC

Product: tail protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTL
RQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD

Sequences:

>Translated_196_residues
MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTL
RQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD
>Mature_196_residues
MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTL
RQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=194, Percent_Identity=55.6701030927835, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 22069; Mature: 22069

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
RYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQ
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH
HLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTPIRTWGDTVAECVINKLCPSH
HCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
TVVLFSYPDEDEDAQD
EEEEEECCCCCCCCCC
>Mature Secondary Structure
MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRADELVIEIDPGQSTELIE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
RYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFFLDQLEALGYTGVTIEQFQ
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH
HLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTPIRTWGDTVAECVINKLCPSH
HCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
TVVLFSYPDEDEDAQD
EEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]