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The map label for this gene is ybcY [H]

Identifier: 82543496

GI number: 82543496

Start: 983435

End: 984091

Strand: Direct

Name: ybcY [H]

Synonym: SBO_0952

Alternate gene names: 82543496

Gene position: 983435-984091 (Clockwise)

Preceding gene: 82543494

Following gene: 82543497

Centisome position: 21.76

GC content: 40.49

Gene sequence:

>657_bases
ATGAAAAAAAACACAGATGATGGGGCTAAAATTTACACACCAATTACCCTAAAGCTTTATGACTGGTGGGTTTTGGGAGT
ATCAAATCGGCTTGCATGGGGATGTCCTACAAAGGAACACCTTCTTCCACACTTTCTGGAACATTTAGGTAACAACCATC
TGGATATTGGTGTTGGAACTGGGTTTTACCTTACTCACGTACCTGAGAGTAGTCTGATATCTTTAATGGATTTGAACGAA
GCTAGCCTGAACGCGGCATCTACAAGGGCTGGGGAATCAAAAATTAAACATAAAATTAGCCATGATGTTTTTGAAACTTA
TCCCGCGGCGTTACATGGTCAATTTGATTCCATTTCCATGTTTTACCTTCTTCACTGCCTGCCTGGAAATATATCTACAA
AAAGCTGTGTAATACGCAATGCGGCGCAGGCCTTAACTGATGATGGAACTCTATACGGAGCCACAATTCTTGGCGATGGA
GTTGTGCACAATAGCTTCGGTCAAAAACTGATGCGCATTTACAATCAGAAAGGCATCTTTTCAAACACAAAAGATTCCGA
AGAAGGCTTAACACATATACTCTCAGAGCATTTCGAGAATGTTAAAACCAAGGTTCAAGGTACTGTAGTAATGTTTTCTG
CTTCAGGGAAAAAATAG

Upstream 100 bases:

>100_bases
GCTATTTCAATATCGCTATGCTGCAGCAGCATTTAACCCCTTGTAATTCATCGCCATAATTGATTTAATTCACAAATAAA
ACTATAATATGGTGAAATTA

Downstream 100 bases:

>100_bases
CATCCAACCGCAGCACGTTCTTGCTTAAGACGTGCTACGGTTTCCTTTACGATTTGGGGTTGCGACTTTACCTCTATTGA
TAATGCATTCCGGCAGAACA

Product: unknown protein encoded within prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNE
ASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDG
VVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK

Sequences:

>Translated_218_residues
MKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNE
ASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDG
VVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
>Mature_218_residues
MKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNE
ASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDG
VVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24050; Mature: 24050

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGT
CCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCC
GFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISM
CEEEEECCHHHHEEHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHH
FYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIF
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCHHHHHHHHHHHCCCCC
SNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
CCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC
>Mature Secondary Structure
MKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGT
CCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCC
GFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFETYPAALHGQFDSISM
CEEEEECCHHHHEEHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHH
FYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIF
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCHHHHHHHHHHHCCCCC
SNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
CCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]