| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543479
Identifier: 82543479
GI number: 82543479
Start: 963499
End: 963630
Strand: Direct
Name: 82543479
Synonym: SBO_0935
Alternate gene names: NA
Gene position: 963499-963630 (Clockwise)
Preceding gene: 82543475
Following gene: 82543481
Centisome position: 21.32
GC content: 54.55
Gene sequence:
>132_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACCCCTGATGGAAATGGAAGCCACGCAGCACCTTAA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases AATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCTGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACC ACCGGCATCCATTCGTTCTT
Product: IS1 encoded protein
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTPDGNGSHAAP
Sequences:
>Translated_43_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTPDGNGSHAAP >Mature_42_residues PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTPDGNGSHAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4319; Mature: 4188
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTPDGNGSHAAP CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTPDGNGSHAAP CCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA