| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yegT [H]
Identifier: 82543465
GI number: 82543465
Start: 949017
End: 950294
Strand: Direct
Name: yegT [H]
Synonym: SBO_0919
Alternate gene names: 82543465
Gene position: 949017-950294 (Clockwise)
Preceding gene: 82543456
Following gene: 82543466
Centisome position: 21.0
GC content: 49.77
Gene sequence:
>1278_bases ATGAAAACAACAGCAAAGCTGTCGTTCATGATGTTTGTTGAATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAATTGGCTGGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGC CAATTCTGGTTGGCTCCATCACTGACCGCTTTTTCTCGGCGCAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTG CTGATGTATTTCGCTGCGCAACAGACCACTTTTGCCGGGTTCTTTCCGTTACTGCTGGCTTACTCTCTAACCTATATGCC GACCATTGCGCTGACTAACAGCATCGCTTTTGCCAACGTGCCGGATGTGGAGCGTGATTTCCCGCGCATTCGTGTGATGG GCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACT AACATCCCGCTGCTGATTACCGCCGGAAGTTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAA AAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCGTCT TTTTCTTCTGTTCATTCCTGTTTGCGATGCCACTGGTGTTCTATTACATCTTTGCCAACGGTTATCTGACCGAAGTCGGC ATGAAAAATGCCACCGGCTGGATGACGCTCGGCCAGTTCTCTGAAATATTCTTTATGCTGGCATTACCGTTTTTCACTAA ACGCTTTGGTATCAAAAAGGTATTATTGCTTGGTCTGGTCATCGCTGCGATCCGCTATGGCTTCTTTATTTACGGTAGTG CGGATGAATATTTCACCTACGCGTTACTGTTCCTCGGTATTTTGCTTCACGGCGTAAGTTACGATTTTTACTACGTTACC GCTTACATCTATGTCGATAAAAAAGCCCCCGTGCATATGCGTACCGCCGCGCAGGGGCTGATCACGCTCTGCTGCCAGGG CTTCGGCAGTTTGCTCGGCTATCGTCTTGGCGGTGTGATGATGGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGAC TGACTTTCAACTGGTCCGGGATGTGGACTTTTGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTC TGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGA
Upstream 100 bases:
>100_bases TTAGCGCGGTCAAGTTTTCACCGTAAAGATATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACC TGTCATGAAGGAATTAAAAG
Downstream 100 bases:
>100_bases AAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGC AGCCGCGTTAAAGCACACTT
Product: nucleoside permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGAL LMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLVFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVIAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVT AYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFF CESDNEITAIKVDDRDIALTQGEVK
Sequences:
>Translated_425_residues MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGAL LMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLVFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVIAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVT AYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFF CESDNEITAIKVDDRDIALTQGEVK >Mature_425_residues MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGAL LMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLVFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVIAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVT AYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFF CESDNEITAIKVDDRDIALTQGEVK
Specific function: Could be involved in nucleoside transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788415, Length=425, Percent_Identity=99.2941176470588, Blast_Score=848, Evalue=0.0, Organism=Escherichia coli, GI87082192, Length=416, Percent_Identity=30.5288461538462, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI1788745, Length=436, Percent_Identity=28.4403669724771, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47347; Mature: 47347
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC PDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFF CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHH LPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLVFYYIFANGYLTEVG CCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVIAAIRYGFFIYGSADEYFTY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH ALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVM HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFCESDNEITAIKVDDRDIALT HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEC QGEVK CCCCC >Mature Secondary Structure MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC PDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFF CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHH LPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLVFYYIFANGYLTEVG CCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVIAAIRYGFFIYGSADEYFTY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH ALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVM HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFCESDNEITAIKVDDRDIALT HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEC QGEVK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]