| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is baeS [H]
Identifier: 82543452
GI number: 82543452
Start: 933245
End: 934648
Strand: Direct
Name: baeS [H]
Synonym: SBO_0904
Alternate gene names: 82543452
Gene position: 933245-934648 (Clockwise)
Preceding gene: 82543451
Following gene: 82543453
Centisome position: 20.65
GC content: 53.92
Gene sequence:
>1404_bases ATGAAGTTCTGGCGACCCGGTATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTAT GCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGT TAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGTAACTGGCGCTTCCTGCGCAACAACGATCGCTTTGTCTTTCAG ATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCGCCGCACGGCTGGCGTACCCAGTT CTGGGTGGTCGATCAAAACAACAAAGTACTGGTTGGTCCGCGAGCGCCGATTCCACCTGACGGTACACGGCGACCCATTC TGGTCAACGGTGCGGAAGTGGGCGCGGTGATTGCCTCCCCTGTTGAGCGGCTGACCCGCAATACTGATATCAATTTCGAT AAACAACAGCGGCAAACCAGCTGGCTGATCGTCGCCCTGGCAACGTTACTCGCGGCGCTCGCCACCTTTCTGCTGGCGCG CGGTTTGCTGGCACCGGTAAAACGACTTGTCGATGGCACGCACAAACTGGCGGCGGGCGATTTCACTACCCGCGTAACGC CCACCAGTGAAGATGAACTGGGCAAACTGGCGCAAGACTTCAACCAGCTTGCCAGCACACTGGAGAAAAACCAGCAAATG CGGCGCGATTTTATGGCCGATATTTCTCACGAACTGCGTACGCCATTAGCGGTGCTGCGCGGTGAACTGGAAGCCATTCA GGATGGCGTGCGTAAATTCACGCCGGAGACGGTGGCGTCTTTACAGGCGGAGGTCGGTACACTGACCAAACTGGTTGACG ATCTCCATCAGTTGTCGATGTCTGATGAAGGCGCTCTCGCCTATCAAAAAGCACCGGTAGATTTGATCCCACTGCTGGAA GTGGCGGGCGGCGCATTTCGCGAACGATTCGCCAGTCGTGGCCTGAAACTGCAATTTTCCCTGCCAGACAGTATTACCGT ATTTGGCGATCGCGACCGTTTAATGCAGTTATTCAATAATTTACTTGAAAACAGCCTGCGCTATACTGACAGCGGCGGCA GCCTGAAAATCTCTGCCGAGCAGCACGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACGAG CAGCTACAAAAATTATTTGAACGTTTTTATCGCACCGAAGGTTCCCGCAACCGCGCCAGCGGTGGTTCCGGGCTGGGGCT GGCGATTTGCCTGAACATTGTTGAAGCACATAATGGCCGCATTATTGCTGCCCATTCGCCTTTTGGCGGGGTAAGCATTA CAGTAGAGTTACCGCTGGAACGGGATTTACAGAGAGAAGTATGA
Upstream 100 bases:
>100_bases GCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCG CGGCGAAAAAGGAGCGCGCA
Downstream 100 bases:
>100_bases CCGAGTTACCAATCGACGAAAACACACCACGTATTTTGATCGTGGAAGATGAACCGAAGCTGGGGCAGTTGCTCATTGAT TATCTGCGTGCTGCGAGCTA
Product: signal transduction histidine-protein kinase BaeS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQ ILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLE VAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDE QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV
Sequences:
>Translated_467_residues MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQ ILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLE VAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDE QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV >Mature_467_residues MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQ ILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLE VAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDE QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=467, Percent_Identity=99.1434689507495, Blast_Score=944, Evalue=0.0, Organism=Escherichia coli, GI1786783, Length=295, Percent_Identity=29.1525423728814, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=28.6764705882353, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1786912, Length=276, Percent_Identity=29.7101449275362, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1786600, Length=253, Percent_Identity=28.0632411067194, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1787374, Length=297, Percent_Identity=25.5892255892256, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788713, Length=244, Percent_Identity=29.0983606557377, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788279, Length=292, Percent_Identity=26.7123287671233, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI145693157, Length=242, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790861, Length=250, Percent_Identity=30, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87081816, Length=254, Percent_Identity=28.740157480315, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787894, Length=307, Percent_Identity=23.7785016286645, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790551, Length=299, Percent_Identity=27.7591973244147, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI87082128, Length=292, Percent_Identity=24.6575342465753, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789808, Length=289, Percent_Identity=26.9896193771626, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=27.5555555555556, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788549, Length=264, Percent_Identity=25.7575757575758, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789149, Length=320, Percent_Identity=22.8125, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789403, Length=299, Percent_Identity=29.0969899665552, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=24.5762711864407, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52059; Mature: 52059
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHH QYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGP HHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECC RAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFDKQQRQTSWLIVALATLLAAL CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM HHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNN CCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHH LLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDEQLQKLFERFYRTEGSRNRAS HHHHCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC GGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV CCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHCCC >Mature Secondary Structure MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHH QYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGP HHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECC RAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFDKQQRQTSWLIVALATLLAAL CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM HHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNN CCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHH LLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDEQLQKLFERFYRTEGSRNRAS HHHHCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC GGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV CCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]