Click here to switch to the map view.

The map label for this gene is asmA [H]

Identifier: 82543440

GI number: 82543440

Start: 910635

End: 912488

Strand: Reverse

Name: asmA [H]

Synonym: SBO_0891

Alternate gene names: 82543440

Gene position: 912488-910635 (Counterclockwise)

Preceding gene: 82543441

Following gene: 82543438

Centisome position: 20.19

GC content: 52.43

Gene sequence:

>1854_bases
ATGAGACGATTTCTGACGACGCTGATGATACTCCTGGTCGTGCTGGTGGCCGGGTTATCTGCGTTAGTGTTGCTGGTGAA
TCCGAATGATTTCCGCAACTATATGGTCAAGCAAGTTGCTGCACGTAGCGGTTATCAATTGCAGCTCGACGGGCCACTGC
GTTGGCACGTCTGGCCGCAGCTTAGTATCCTCTCCGGGCGAATGTCTCTCACCGCCCAGGGCGCGAGCCAGCCACTGGTT
CGCGCCGACAACATGCGTCTGGACGTGGCGCTTTTACCACTACTGAGTCATCAACTGAGCGTTAAGCAGGTGATGCTAAA
AGGGGCAGTGATCCAACTGACGCCGCAGACGGAAGTGGTGCGCAGTGAAGACGCTCCGGTTGCACCGCGCGACAATACCT
TGCCGGATCTGTCAGACGATCGCGGATGGTCGTTTGATATATCCAGTCTTAAGGTGGCGGACAGCGTGCTGGTGTTCCAG
CATGAAGATGACGAGCAGGTGACAATCCGCAATATTCGCCTGCAAATGGAACAAGATCCCCAACATCGTGGTTCATTTGA
GTTCTCCGGGCGGGTTAATCGCGATCAGCGCGATCTCACGATATCCCTTAACGGTACGGTAGATGCTTCTGATTATCCGC
ATGATTTAACGGCGGCTATTGAACAAATTAACTGGCAGTTGCAGGGTGCAGATTTACCAAAACAAGGTATTCATGGGCAG
GGGAGTTTCCAGGCCCAGTGGCAGGAGTCACATAAACGCCTTTCATTTAACCAAATTAGTTTGACCGCCAATGACAGTAC
GCTGAGCGGGCAAGCACAGGTCACGCTGACAGAGAAACCGGAATGGCAGCTGAGACTGCAATTCCCGCAACTGAATCTTG
ACAACCTCATCCCGCTTAATGAAACAGCGAATGGTGAAAACGGTGCCGCGCAGCAGGGGCAGAGCCAATCAACGTTGCCG
CGCCCGGTCATTTCTTCGCGTATTGATGAACCGGCATATCAGGGACTGCAAGGCTTTACGGCTGATATTTTGTTGCAGGC
CAGTAACGTGCGCTGGCGCGGAATGAATTTTACAGATGTTGCCACGCAAATGACCAACAAGTCGGGTTTGCTGGAAATTA
CTCAACTGCAGGGCAAGCTTAACGGTGGACAGGTTTCACTGCCGGGCACGCTGGACGCGACATCAATAAATCCGCGGATA
AACTTCCAGCCACGGCTGGAAAACGTTGAGATTGGCACCATTCTGAAGGCGTTTAACTATCCGATTTCGTTGACCGGAAA
GATGTCACTGGCTGGTGATTTCTCCGGTGCTGACATAGATGCCGACGCATTCCGCCACAACTGGCAAGGACAGGCACATG
TCGAAATGACCGACACGCGCATGGAAGGGATGAACTTCCAGCAGATGATTCAGCAAGCGGTAGAACGTAATGGTGGTGAT
GTGAAGGCCGCTGAAAACTTCGATAACGTAACGCGTCTTGACCGCTTTACCACCGATTTGACGTTGAAGGATGGCGTCGT
GACGTTAAACGACATGCAAGGTCAATCGCCTGTGCTGGCGCTTTCCGGGGCTGGTACGTTGAATCTGGCGGAGCAAACCT
GCGACACCCAGTTTGATATTCGGGTCGTGGGTGGCTGGAACGGGGAAAGCAAACTGATTGATTTCCTTAAAGAAACGCCA
GTACCGCTGCGGGTTTATGGCAACTGGCAGCAACTCAATTACAGTCTGCAAGTGGATCAGTTACTGCGCAAACATCTACA
GGACGAAGCGAAACGTCGTCTGAATGACTGGGCCGAGCGGAATAAAGATTCCCGCAATGGCAAAGATGTGAAGAAGTTGC
TGGAGAAGATGTAG

Upstream 100 bases:

>100_bases
GCGACCTTACAACCGCCGTGAAGATGCGAAATATCGCAACCAGCAGGGCGCGGTAGCCAGCCGAATCGATAAAGACTAAT
TCAGGCCCATTGAGGATACC

Downstream 100 bases:

>100_bases
GTTACCTGGTGACCTGTCCTGTAGGCCTGATAAGACGCGTAAAGCGTCGCATCAGGCGTTCGTGGCGGCATCATTATATT
CTGAATATGTAAGATCGAAG

Product: assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIHGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM

Sequences:

>Translated_617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIHGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM
>Mature_617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIHGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=617, Percent_Identity=98.8654781199352, Blast_Score=1243, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68912; Mature: 68912

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHHCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCC
LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVV
EEEECCCEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDP
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEECCCCEEEEEEEEEEECCCC
QHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIHGQ
CCCCCEEECCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCC
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLN
CCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEECCC
ETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCEEEEEEECCCEECCCCHHHH
ATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNY
HHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
PISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
CEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHCCCCHHHHHHHHHHCCCCC
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALSGAGTLNLAEQTCDTQFDI
EEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCEEEEECCCCEEEHHHHCCCEEEE
RVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAER
EEEECCCCHHHHHHHHHCCCCCEEEECCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
NKDSRNGKDVKKLLEKM
CCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSGYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHHCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCC
LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEVV
EEEECCCEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDP
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEECCCCEEEEEEEEEEECCCC
QHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIHGQ
CCCCCEEECCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCC
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLN
CCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEECCC
ETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCEEEEEEECCCEECCCCHHHH
ATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNY
HHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
PISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
CEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHCCCCHHHHHHHHHHCCCCC
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALSGAGTLNLAEQTCDTQFDI
EEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCEEEEECCCCEEEHHHHCCCEEEE
RVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAER
EEEECCCCHHHHHHHHHCCCCCEEEECCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
NKDSRNGKDVKKLLEKM
CCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]