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The map label for this gene is wzzB [H]

Identifier: 82543404

GI number: 82543404

Start: 866871

End: 867905

Strand: Reverse

Name: wzzB [H]

Synonym: SBO_0853

Alternate gene names: 82543404

Gene position: 867905-866871 (Counterclockwise)

Preceding gene: 82543405

Following gene: 161984963

Centisome position: 19.2

GC content: 46.57

Gene sequence:

>1035_bases
ATGGCGATTATCGCTAAACTATGGCGACTTAAAATTATTTCGTCCGTTAGGGTAATGATGAGAGTAGAAAATAATAATGT
TTCTGGGCAAAACCATGATCCGGAACAGATTGATTTGATTGATTTACTGGTGCAGTTGTGGCGTGGCAAGATGACAATTA
TCATCTCTGTCATTGTTGCTATTGCCCTGGCTATAGGGTATCTGGCCGTTGCCAAAGAAAAGTGGACTTCCACAGCTATC
GTTACTCAACCTGATGTGGGGCAAATCGCTGGTTATACCAACGCGATGAATGTGATCTACGGATCGGCTGTACCGAAAGT
CTCCGACATTCAGGCTTCACTTATCGGACGTTACAGCACTGCATTCTCAGCATTAGCGGAAACGCTGGATAACCAGGAAG
AAGCAGAAAAGCTGACCATTGAGCCTACCGTCAAAAATCAGTCATTACCTTTAGCGGTGTCTTATGTTGGTGAAACACCT
GAAGGTGCTCAGAAGCAGCTGGCGAAGTATATCCAGCAAGTTGACGACCAGGTAAATGAAGAACTGGGAAAAGACCTGAA
AGACAACATCGCGCTGCGTATGAAAAACTTGCAGGATTCTCTGAAAACTCAGGAAGTAGTTGCGCAGGAGCAGAAAGATC
TGCGTATCCGTCAGATTCAGGAAGCGTTGCAGTATGCGAATCAGGCGCAGGTGACAAAGCCACAGGTTCAGCAGACTGAA
GATGTGACACAAGATACGTTGTTCCTTTTGGGGAGCGAAGCGCTGGAGTCGATGATTAAGCATGAAGCGACTCGTCCGTT
GGTGTTCTCACCAAACTACTATCAGACTCGTCAAAACCTGCTGGATATCGACAATCTTGACGTTGATAAACTTGATATTC
ATGCTTACCGCTATGTAATGAAACCGACGTTACCTATTCGTCGCGATAGCCCGAAAAAGGCAATTACCTTGATTCTGGCG
GTGCTGCTGGGCGGCATGGTTGGCGCGGGGATTGTCTTGGGGCGTAACGCTCTGCGTAATTACAACGCGAAGTAA

Upstream 100 bases:

>100_bases
GCAGTGACTAACATCCTGTTATCATGGCGATTTTCGCCCTGATTCTCTTATGTTCCCTTTGTAATAATTCATTATTTTTA
TCATTTACCCTATAGCATTC

Downstream 100 bases:

>100_bases
TCTTTTCGGTTTTAAAGAAAAGGGGCAGGGTGGTGACACCTTGCCCGTTTTTTTTTCCGGATGCTACAACAATATCGCAT
CCGCTTACCCCGCAACTCAC

Product: regulator of length of O-antigen component of lipopolysaccharide chains

Products: NA

Alternate protein names: Polysaccharide antigen chain regulator [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAIIAKLWRLKIISSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAI
VTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYSTAFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETP
EGAQKQLAKYIQQVDDQVNEELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTE
DVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHAYRYVMKPTLPIRRDSPKKAITLILA
VLLGGMVGAGIVLGRNALRNYNAK

Sequences:

>Translated_344_residues
MAIIAKLWRLKIISSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAI
VTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYSTAFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETP
EGAQKQLAKYIQQVDDQVNEELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTE
DVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHAYRYVMKPTLPIRRDSPKKAITLILA
VLLGGMVGAGIVLGRNALRNYNAK
>Mature_343_residues
AIIAKLWRLKIISSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIV
TQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYSTAFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPE
GAQKQLAKYIQQVDDQVNEELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTED
VTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHAYRYVMKPTLPIRRDSPKKAITLILAV
LLGGMVGAGIVLGRNALRNYNAK

Specific function: Confers a modal distribution of chain length on the O- antigen component of lipopolysaccharide (LPS). Gives rise to a reduced number of short chain molecules and increases in numbers of longer molecules, with a modal value of 13 (in strain O111/M92) and o

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082029, Length=326, Percent_Identity=90.1840490797546, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI87082332, Length=335, Percent_Identity=26.5671641791045, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1786802, Length=345, Percent_Identity=27.2463768115942, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 38339; Mature: 38208

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIAKLWRLKIISSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVA
CHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
IALAIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYST
HHHHHHHHHHHHHHHCCEEEEECCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPEGAQKQLAKYIQQVDDQVNE
HHHHHHHHHCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
ELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHAYRYVM
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AIIAKLWRLKIISSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVA
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
IALAIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYST
HHHHHHHHHHHHHHHCCEEEEECCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPEGAQKQLAKYIQQVDDQVNE
HHHHHHHHHCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
ELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHAYRYVM
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9383197 [H]