| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is hisH [H]
Identifier: 82543400
GI number: 82543400
Start: 864084
End: 864674
Strand: Direct
Name: hisH [H]
Synonym: SBO_0849
Alternate gene names: 82543400
Gene position: 864084-864674 (Clockwise)
Preceding gene: 82543399
Following gene: 82543401
Centisome position: 19.12
GC content: 56.35
Gene sequence:
>591_bases ATGAACGTGGTGATCCTTGATACTGGCTGCGCCAACCTGAACTCGGTGAAGTCTGCCATTGCGCGCCACGGTTATGAACC CAAAGTCAGCCGTGACCCGGACGTCGTGTTGCTGGCCGATAAACTATTTTTACCCGGCGTTGGCACCGCACAAGCAGCGA TGGATCAGGTGCGTGAGCGCGAGCTGTTTGATCTCATCAAAGCCTGTACCCAACCGGTGCTAGGCATCTGCTTAGGGATG CAACTGCTGGGGCGGCGCAGCGAAGAGAGCAACGGCGTCGATTTGCTGGGCATCATCGACGAAGACGTGCCGAAAATGAC CGACTTTGGTCTACCGCTGCCCCATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTG AAGACGGCGCGTACTTTTACTTTGTTCACAGCTACGCAATGCCAGTCAATCCGTGGACCATCGCCCAGTGTAATTACGGC GAACCGTTCACCGCGGCGGTACAAAAAGATAACTTCTACGGCGTGCAGTTCCACCCGGAGCGTTCTGGTGCCGCTGGCGC TAAGTTGCTGAAAAACTTCCTGGAGATGTGA
Upstream 100 bases:
>100_bases ACCACCGTGTAGAGAGCCTGTTCAAAGCTTTTGGTCGCACCCTGCGCCAGGCCATCCGCGTGGAAGGCGATACCCTGCCC TCGTCGAAAGGAGTGCTGTA
Downstream 100 bases:
>100_bases TGATTATTCCGGCATTAGATTTAATCGACGGCACCGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTAC GGTAACGACCCGCTGCCGCG
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGM QLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM
Sequences:
>Translated_196_residues MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGM QLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM >Mature_196_residues MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGM QLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=196, Percent_Identity=100, Blast_Score=409, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319725, Length=209, Percent_Identity=35.4066985645933, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 21653; Mature: 21653
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00442 GATASE_TYPE_I ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRER CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHH ELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCC VYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPE CCCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCC RSGAAGAKLLKNFLEM CCCCHHHHHHHHHHCC >Mature Secondary Structure MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRER CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHH ELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCC VYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPE CCCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCC RSGAAGAKLLKNFLEM CCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]