| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yeeA
Identifier: 82543385
GI number: 82543385
Start: 848802
End: 849395
Strand: Reverse
Name: yeeA
Synonym: SBO_0833
Alternate gene names: 82543385
Gene position: 849395-848802 (Counterclockwise)
Preceding gene: 82543386
Following gene: 82543384
Centisome position: 18.79
GC content: 48.48
Gene sequence:
>594_bases ATGTTGTTTACCGGTATCTGGCCACAACGGGCGTTCATCCACTGGCGCATTCAACTGGCGAAAAGTCTGACCGAGTATAA TCGGGTCTATCAATCTGCATTCTCACCGAACTTACTCGAACGCCCACGTCTGGAAAGCCATCTACAAAAACTCCTGACCG ATGCCGTGAAAATGCGTGGGCTGATTGCGCCCGCCAGCAAAGAAACCCGTATTCCAAAATCGATATATGAAGGTATCCAG ACCATTAACCGCAATCTGGTTTGTATGCTGGAGTTGCAAATCAATGCGTACTGGGCCACGCGCCCCAGCCATTTCGTGTT ATTGAACGCGCAAAAACTTCGTGATACCCAGCACATGATGCAGCAAATACTGCTGAGCCTTGTTCATGCGTTGTACGAAG GTAATCCGCAGCCGGTTTTTGCCAATACGGAAAAATTGAACGATGCAGTGGAAGAGCTGCGTCAGTTGCTCAATAACCAC CATGACCTGAAGGTTGTGGAAACACCAATCTATGGTTATGTGTGGCTGAACATGGAAACGGCACATCAGCTTGAGTTGCT ATCGAATCTGATTTGCCGGGCCTTGCGCAAATAA
Upstream 100 bases:
>100_bases TAACTCGGTGGCCAGTTTTTGTTGACCACTTCACCCGACAGGTGAAATTGATACGGCGTTATGGCGAAGCGGCGATGTGC TCCTCGGCTCTTTACTGGCA
Downstream 100 bases:
>100_bases TTCCTGAACTACAGAATCATCTTGCTGCTGCTTCGATTCAGCAAGGATAAAGGGTATGATAGTGAAAAGGGATAAAAGCA TTGTCATCTGCGGCAGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQ TINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNH HDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
Sequences:
>Translated_197_residues MLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQ TINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNH HDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK >Mature_197_residues MLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQ TINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNH HDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=197, Percent_Identity=100, Blast_Score=409, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YEEA_ECOLI (P33011)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - EMBL: U00009 - PIR: G64965 - RefSeq: AP_002608.1 - RefSeq: NP_416512.1 - ProteinModelPortal: P33011 - STRING: P33011 - EnsemblBacteria: EBESCT00000000426 - EnsemblBacteria: EBESCT00000016308 - GeneID: 946545 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1990 - KEGG: eco:b2008 - EchoBASE: EB1837 - EcoGene: EG11891 - eggNOG: COG1289 - GeneTree: EBGT00050000010993 - HOGENOM: HBG297971 - OMA: HGEWASV - ProtClustDB: CLSK880266 - BioCyc: EcoCyc:EG11891-MONOMER - Genevestigator: P33011 - InterPro: IPR006726
Pfam domain/function: PF04632 FUSC
EC number: NA
Molecular weight: Translated: 23010; Mature: 23010
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18289aac)-; HASH(0x17ef2250)-; HASH(0x17b9e008)-; HASH(0x1826ff20)-; HASH(0x1840b0dc)-; HASH(0x17eed65c)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH LIAPASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMM HCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHH QQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMET HHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCH AHQLELLSNLICRALRK HHHHHHHHHHHHHHHCH >Mature Secondary Structure MLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH LIAPASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMM HCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHH QQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMET HHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCH AHQLELLSNLICRALRK HHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503