| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543330
Identifier: 82543330
GI number: 82543330
Start: 785332
End: 785634
Strand: Direct
Name: 82543330
Synonym: SBO_0776
Alternate gene names: NA
Gene position: 785332-785634 (Clockwise)
Preceding gene: 82543329
Following gene: 82543331
Centisome position: 17.38
GC content: 52.48
Gene sequence:
>303_bases ATGAGCGATAAGCAGACTGAAAAGACCATTCAACTGGATACTCCCATCATGCGCGGTAAAACAGAAATTACCGAAATTGT GTTGCGTAAACCGCAGTCCGGTGCGCTGCGCGGCACACGCCTGCAGGCCATTATGGATATGGATGTGAACGCGATGATGA CCGTGATCCCCCGCATCTCCAGTCCGGCACTGACTGCACAGGAAATTGCAGAGATGGACCCGGCAGATCTCACTGCCATG TCGGTTGAGGTTGTCACTTTTTTGTTGAAGAAGTCGGTGCTTGCCGGTTTACCGACAGCCTGA
Upstream 100 bases:
>100_bases CGGTGTGGACCTGATGGAAGCGCACCGCAACGCCCTCGGCCTCTGATGTATCTGAACGGCGCGGAATGCCGCGCCAGAAC CTAATTTACAGGACAACAAA
Downstream 100 bases:
>100_bases CGGTTGACGATCTGGTGGCTGATATCGCCACCATCTTTCACTGGCCGCCATCCGTTACTGACGTTATGCCGCTGACCGAA GTGCTGGAATGGCGGGATAA
Product: phage tail protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage Tail Protein E; Phage Tail E Family Protein; Phage-Related Tail Protein; Gp28 Phage Tail Protein E; Phage P2 GpE-Like Tail Protein; Tail Bacteriophage; Prophage Tail Protein; GpE+E; Phage Tail E; Bacteriophage-Related Tail Protein; Phage Related Tail Protein; Tail Protein E; Phage Protein; Tail Protein
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAM SVEVVTFLLKKSVLAGLPTA
Sequences:
>Translated_100_residues MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAM SVEVVTFLLKKSVLAGLPTA >Mature_99_residues SDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMS VEVVTFLLKKSVLAGLPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10872; Mature: 10741
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRIS CCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC SPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRIS CCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC SPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA