Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82543309

Identifier: 82543309

GI number: 82543309

Start: 771438

End: 772301

Strand: Direct

Name: 82543309

Synonym: SBO_0755

Alternate gene names: NA

Gene position: 771438-772301 (Clockwise)

Preceding gene: 82543308

Following gene: 82543313

Centisome position: 17.07

GC content: 32.18

Gene sequence:

>864_bases
ATGAATAAATTAAAAAGACCTGTTTTTAAAGATTATTCTGCATTTAAAAAACTATCTGCAAATAAGAGATTAAAACATCA
TTCTGTTCTGAATGGACAGGATACATTTATACTTAATGCATATAGATCGTACATAAAGAATAAAGGGTATCTTAATGTCA
ATTCTTGTGGCGTATTGAGTAACAATATTGCTGAAGCTTTGAGATATTATTATAACAATCCCGCAAAGTGTTTATCTATA
ATTGATGATATAAGAGCAGCTAATTCTAACTCTCTATGTCCAATGTGTGGTTCAATGCATAGCGGGACTTTGGATCATGT
TTTACCCAAGGAAAACTATCCAGAATTTTCTTTATTCACTAAGAATTTGGTTCCTGCTTGCAAATGTAATACTTTCAAAA
GTACTACTATAGCTAATTCTGCAGGCCATCGGATGCTGCATCCATATTTTGATAATATATTAAAACAAAGATTAATATGT
GCTAATTTTTCTAAATTAGGGCGAACACCTACAATTGATGTAAAAATCATAATTGACCCAATGTCACCAGAATATAACAA
TGTTAAGTATCATCTTGATAATGTTGTTATCAAGAATAATATTAAGGGGTATTTGTCTGAACAATGGGAGTCGTTTTACT
TATATCCTGAGCTTGTTATTAGAGGACTGAATAAGAGTCTTTCTACTTATAGCGATGTATATGAGTTGTTGACTCGCGAG
TTGTTGCTGTTGGATGAAAAACATAAAGGTAAAAATAATTGGAATTCGGTTTTTGTAGCTGGGTTAATTCGACCTGATGT
GATTAGGTGGATACTCTGTGAATTACATTTAGGTAACAGAAGTCCAGACGGTCGTCTCATATGA

Upstream 100 bases:

>100_bases
ATTGCAAAGAATATGTCTTGGGATGATGTTGAATCTAAATATAGCGAGGACTTATCACTTAATGTATTAACTGCGTTGAG
AAATGAAATGGGCAATTGAA

Downstream 100 bases:

>100_bases
TTTTTTGCATCTTCAGCGTGTATCTGCACGCTGAAGAAATTCATAAAAACTGCTGGCTATTAATAAATTTTTTAGCTGTG
TTAAAGAACCTCATTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Hnh Endonuclease

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFILNAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSI
IDDIRAANSNSLCPMCGSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNILKQRLIC
ANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESFYLYPELVIRGLNKSLSTYSDVYELLTRE
LLLLDEKHKGKNNWNSVFVAGLIRPDVIRWILCELHLGNRSPDGRLI

Sequences:

>Translated_287_residues
MNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFILNAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSI
IDDIRAANSNSLCPMCGSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNILKQRLIC
ANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESFYLYPELVIRGLNKSLSTYSDVYELLTRE
LLLLDEKHKGKNNWNSVFVAGLIRPDVIRWILCELHLGNRSPDGRLI
>Mature_287_residues
MNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFILNAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSI
IDDIRAANSNSLCPMCGSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNILKQRLIC
ANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESFYLYPELVIRGLNKSLSTYSDVYELLTRE
LLLLDEKHKGKNNWNSVFVAGLIRPDVIRWILCELHLGNRSPDGRLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32900; Mature: 32900

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFILNAYRSYIKNKGYLNVNSCGVLS
CCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHHHHCCCCCEEECCCCCHH
NNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMCGSMHSGTLDHVLPKENYPEFSLFT
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHCCCCCCCCCHHHHH
KNLVPACKCNTFKSTTIANSAGHRMLHPYFDNILKQRLICANFSKLGRTPTIDVKIIIDP
HHCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
MSPEYNNVKYHLDNVVIKNNIKGYLSEQWESFYLYPELVIRGLNKSLSTYSDVYELLTRE
CCCCCCCEEEEECCEEEECCCHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLDEKHKGKNNWNSVFVAGLIRPDVIRWILCELHLGNRSPDGRLI
HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFILNAYRSYIKNKGYLNVNSCGVLS
CCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHHHHCCCCCEEECCCCCHH
NNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMCGSMHSGTLDHVLPKENYPEFSLFT
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHCCCCCCCCCHHHHH
KNLVPACKCNTFKSTTIANSAGHRMLHPYFDNILKQRLICANFSKLGRTPTIDVKIIIDP
HHCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
MSPEYNNVKYHLDNVVIKNNIKGYLSEQWESFYLYPELVIRGLNKSLSTYSDVYELLTRE
CCCCCCCEEEEECCEEEECCCHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLDEKHKGKNNWNSVFVAGLIRPDVIRWILCELHLGNRSPDGRLI
HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA