Click here to switch to the map view.

The map label for this gene is ybiJ [H]

Identifier: 82543247

GI number: 82543247

Start: 704453

End: 704713

Strand: Reverse

Name: ybiJ [H]

Synonym: SBO_0690

Alternate gene names: 82543247

Gene position: 704713-704453 (Counterclockwise)

Preceding gene: 82543248

Following gene: 82543243

Centisome position: 15.59

GC content: 49.43

Gene sequence:

>261_bases
ATGAAAACTATCAATACTGTTGTTGCTGCTATGGCTCTTTCAACTCTATCATTTGGCGTGTTCGCGGCGGAACCGGTAAC
GGCATCCCAGGCACAGAACATGAATAAAATCGGCGTGGTTTCTGCCGATGGCGCATCCACCCTCGATGCCCTGGAAGCGA
AACTGACTGAGAAAGCCGCGGCAGCCGGTGCCAGTGGATACAGCATCACTTCTGCCACCAACAACAATAAATTAAGCGGT
ACTGCGGTAATTTATAAGTAA

Upstream 100 bases:

>100_bases
GTCAATTCTCTTCGATTTTATCTCTCGAAAAAAAACGTGATACTCATCACATCGACGAAACAACGTCACTTATACAAAAA
TCACCTGCGAGAGATTAATT

Downstream 100 bases:

>100_bases
TTCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAACAGATGCCTGATGCGACGCTACCGCGTCTTATCAGGCCTAC
AAAATCCGAACCGTTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSG
TAVIYK

Sequences:

>Translated_86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSG
TAVIYK
>Mature_86_residues
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSG
TAVIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787021, Length=86, Percent_Identity=98.8372093023256, Blast_Score=164, Evalue=1e-42,
Organism=Escherichia coli, GI1787355, Length=86, Percent_Identity=45.3488372093023, Blast_Score=69, Evalue=5e-14,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=45.3488372093023, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI87082233, Length=88, Percent_Identity=45.4545454545455, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8598; Mature: 8598

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLTEKAA
CCHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
AAGASGYSITSATNNNKLSGTAVIYK
HCCCCCCEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLTEKAA
CCHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
AAGASGYSITSATNNNKLSGTAVIYK
HCCCCCCEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]