Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ybhG [H]

Identifier: 82543240

GI number: 82543240

Start: 695763

End: 696761

Strand: Reverse

Name: ybhG [H]

Synonym: SBO_0683

Alternate gene names: 82543240

Gene position: 696761-695763 (Counterclockwise)

Preceding gene: 82543241

Following gene: 82543239

Centisome position: 15.42

GC content: 57.26

Gene sequence:

>999_bases
GTGATGAAAAAACCTGTCGTGATCGGACTGGCGGTAGTGGTACTTGCCGCCGTGGTTGCCGGAGGCTACTGGTGGTATCA
AAGCCGCCAGGATAACGGCCTGAAGCTGTATGGCAACGTGGATATTCGTACGGTGAATCTTAGTTTCCGTGTTGGGGGGC
GCGTTGAATCGCTGGCGGTGGACGAAGGTGATGCGATCAAAGCGGGCCAGGTGCTGGGCGAACTGGATCACAAGCCGTAT
GAGATTGCCCTGATGCAGGTGAAAGCGGGCGTCTCGGTGGCACAGGCGCAGTATGACCTGATGCTTGCCGGGTATCGCGA
TGAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCC
AGCAAGGACTGTGGAAAAGCCGCACCATTTCGGCAAATGACCTGGAAAATGCCCGCTCCTCGCGCAACCAGGCACAGGCA
ACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAG
CCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGCTGAATTTACAGGACTCAACGTTGATAGCACCGTCTGATGGCA
CACTGTTAACGCGCGCGGTGGAGCCAGGCACGGTTCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCG
GTGTGGGTGCGCGCTTATGTTGATGAACGGAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGG
TCGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTTCGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACAC
CGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCG
GTGACGGTGCAATTCGGTAACGAGGCAGGACATGAATGA

Upstream 100 bases:

>100_bases
GCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGA
TTATCGCAAAGGAGTTTGTA

Downstream 100 bases:

>100_bases
TGCCGTTATCACGCTGAACGGCCTGGAAAAACGCTTTCCGGGCATGGGCAAGCCCGCCGTCGCGCCGCTCGATTGTACCA
TTCACGCCGGTTATGTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY
EIALMQVKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRNQAQA
TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP
VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP
VTVQFGNEAGHE

Sequences:

>Translated_332_residues
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY
EIALMQVKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRNQAQA
TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP
VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP
VTVQFGNEAGHE
>Mature_332_residues
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPY
EIALMQVKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRNQAQA
TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP
VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP
VTVQFGNEAGHE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=332, Percent_Identity=98.4939759036145, Blast_Score=664, Evalue=0.0,
Organism=Escherichia coli, GI1789900, Length=308, Percent_Identity=30.1948051948052, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI87081796, Length=292, Percent_Identity=26.7123287671233, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790519, Length=245, Percent_Identity=26.530612244898, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789041, Length=262, Percent_Identity=25.1908396946565, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081951, Length=269, Percent_Identity=23.7918215613383, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 36470; Mature: 36470

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTVNLSFRVGGRVESLAV
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEEEEEEEEEECCCEEEEEE
DEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQA
CCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH
QAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRNQAQATLKSAQDKLRQYRSGNREQD
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEECCCCEEEEEECCC
VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL
EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCE
VYRLRIVVTDADDALRQGMPVTVQFGNEAGHE
EEEEEEEEECCHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTVNLSFRVGGRVESLAV
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEEEEEEEEEECCCEEEEEE
DEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQA
CCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH
QAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRNQAQATLKSAQDKLRQYRSGNREQD
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRP
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEECCCCEEEEEECCC
VWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL
EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCE
VYRLRIVVTDADDALRQGMPVTVQFGNEAGHE
EEEEEEEEECCHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA