Click here to switch to the map view.

The map label for this gene is 82543208

Identifier: 82543208

GI number: 82543208

Start: 658865

End: 660250

Strand: Direct

Name: 82543208

Synonym: SBO_0647

Alternate gene names: NA

Gene position: 658865-660250 (Clockwise)

Preceding gene: 82543205

Following gene: 82543209

Centisome position: 14.58

GC content: 50.22

Gene sequence:

>1386_bases
ATGAAGGCCAGTGATAAACCCCGCCAGCTGGCGGTCCCCTTTGCGAGTACCGGAGATAAAAACCGTATCCCGGACAAGGC
GACACAGCAGACCAGAGAGAGCGGTAATGCTGCGTATGATTCAGGTTTTCCTCCGGTGACCATGACAGCGGTCTCAGCGG
GAGGTATACCGCCACACGGCAAGGATTTTAACGGTCTGATGTACGATATTACCGCAGCAATACGGTTCGCCCAGGCTGGC
GGTTTGTACACGTATAATGCCGGTTTTGCGGGGGCCATTGGTGGATATGCAAAAGGAGCCATTCTCGCCGGAGTCGCAAC
AACAGCGGTCTGGCTGAATACCACAGACGATAACCTGACCGATCCTGAAGGCTCCGACAGTGCGGGCTGGGTAAATCTTC
TTGAGGATCCGAAAAGGATATTCCTGCGGCAGAAGAACAATCTGTCAGACCTTCAGAATAAAGGGACGGTACGGGATAAT
CTTCAGGTTTACAGTAAAGAGCAGTCAGATCAACGCTATGTTCATCGGGAAGGCGATAAAATAACCGGAGAGCTGAAAAT
CCGTGGTGTTAATGCGCTGAGGATTTTCAACGAAGCTTTTGGCCTGATTTTTCGTCGTTCGGAAGAGTGCCTGCACCTTA
TTCCCACCAGTGAAGGTCAGGGGGAAAATGGCGATATTGGTCCCCTGCGCCCGTTCACCATTAATTTGCGGACGGGTGAA
ATATCCATGTCGCATAAAGTGTCTGTTGGCGGTGGTTCGCAGGTCAATGGTGCGCTGGGTATCGGCGTTCAGAACGCCCT
GGGGGGGAATTCAATTGTTCTTGGTGATAATGACACCGGATTTAAACAGAATGGAGACGGTATTCTGGATGTTTATGCTA
ATAGTCAGCGTGTATTCCGCTTTCAGAATGGAGTGGCTATTGCTTTTAAGAATATTCAGGCCGGAACTGCCAGAAAATTC
ACGTTATCCAGCGCCAACAACTCCACGAAAAATGCAGCGTTTTATTTGTGGGGTAATCCATCCAGGTCTGTTGTTGCAGA
GCTTGGCGATGATTCAGGCTGGCATTTTTTCAGCCAGAGGAATACAGATAACAGCATCACGTTCGCCGTAAACGGACAGG
TAATTCCGTTAAATTACGGAAACTTCGATGCCCGCTATAAATATCGAACAGAGGGGGTACAGGATGTACGGTATGGCCAT
GAAATGTATTACAGCCCCGGCAGTAACACCGTTTCGTGGAGATTTCGCGCACCTTCGGGACACGGGCTGTCAGGGATAGC
GATATCGGATACCGGCCGTGACTCAGCGGATAACGTCAACGGCGTGTATTACCGCCCGCTTCAGAAACTGATTAATGGCA
CCTGGTATAACGTGGCGAGTGTTTAA

Upstream 100 bases:

>100_bases
TCCGCGCTCTCGTTGGCAGAACTGGCGATTATCCAGTCGTCGGGTGCACTGCCGTCCCCGCCGGGTGTTTATGTTTCAGT
AGTTTTAAAGGAGTCCCGTA

Downstream 100 bases:

>100_bases
CAATGTTGCATTTAAAAAATATTACTGCGGGCAATCCGAAAACCGTGGAACAATATCAGCTGACAAAACAATATGATGTC
ACCTGGCTTTTTTCGAAAGA

Product: tail fiber protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Side Tail Fiber Protein; Bacteriophage Tail Protein; Tail Fiber Protein-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Tail Fiber; Side Tail Fiber Protein Bacteriophage Origin; Phage Tail Family; Tail Protein; Phage Tail Fiber Protein H

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAG
GLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDN
LQVYSKEQSDQRYVHREGDKITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGE
ISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGTARKF
TLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGH
EMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV

Sequences:

>Translated_461_residues
MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAG
GLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDN
LQVYSKEQSDQRYVHREGDKITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGE
ISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGTARKF
TLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGH
EMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV
>Mature_461_residues
MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAG
GLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDN
LQVYSKEQSDQRYVHREGDKITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGE
ISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGTARKF
TLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGH
EMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49900; Mature: 49900

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHG
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC
KDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLT
CCCCCEEEEEEHHHHHHHCCCEEEECCCCCCCCCCHHCCHHEEEEEEEEEEEECCCCCCC
DPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDNLQVYSKEQSDQRYVHREGDK
CCCCCCCCCEEEECCCCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCE
ITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGE
EEEEEEEEECHHEEHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECE
ISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFR
EEEEEEEEECCCCCCCCEEEECCHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCEEEEE
FQNGVAIAFKNIQAGTARKFTLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQR
EECCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHEECCCCCCEEEEECC
NTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFRAPSG
CCCCEEEEEECCEEEEEECCCCCCEEEEECCCHHHHHCCCEEEECCCCCEEEEEEECCCC
HGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV
CCEEEEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFPPVTMTAVSAGGIPPHG
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC
KDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAILAGVATTAVWLNTTDDNLT
CCCCCEEEEEEHHHHHHHCCCEEEECCCCCCCCCCHHCCHHEEEEEEEEEEEECCCCCCC
DPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDNLQVYSKEQSDQRYVHREGDK
CCCCCCCCCEEEECCCCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCE
ITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGE
EEEEEEEEECHHEEHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECE
ISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGDNDTGFKQNGDGILDVYANSQRVFR
EEEEEEEEECCCCCCCCEEEECCHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCEEEEE
FQNGVAIAFKNIQAGTARKFTLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGWHFFSQR
EECCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHEECCCCCCEEEEECC
NTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFRAPSG
CCCCEEEEEECCEEEEEECCCCCCEEEEECCCHHHHHCCCEEEECCCCCEEEEEEECCCC
HGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV
CCEEEEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA