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The map label for this gene is ybgS [H]

Identifier: 82543173

GI number: 82543173

Start: 628589

End: 628969

Strand: Reverse

Name: ybgS [H]

Synonym: SBO_0608

Alternate gene names: 82543173

Gene position: 628969-628589 (Counterclockwise)

Preceding gene: 82543175

Following gene: 82543172

Centisome position: 13.92

GC content: 49.87

Gene sequence:

>381_bases
ATGAAAATGACAAAACTGGCCACATTATTTCTGACTGCCACTCTAAGCCTTGCCAGCGGTGCCGCACTGGCTGCCGATAG
CGGAGCGCAAACTAATAACGGCCAGGCAAACGCCGCAACTGATGCGGGCCAGGTAGCCCCTGACGCCCGTGAAAATGTCG
CGCCAAATAACGTCGACAATAACGGGGTAAATACCGGTTCTGGCGGCACAATGCTGCATTCGGATGGTTCTTCAATGAAC
AATGACGGAATGACCAAAGATGAAGAGCACAAGAACACCATGTGCAAAGATGGTCGATGTCCGGATATCAATAAAAAGGT
ACAAACCGGTGATGGCATCAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAA

Upstream 100 bases:

>100_bases
TCATAAACTGGCTGAAATCTTAAACCAATGCCTTATATTCACCTGCAAATGCACTGTTGGAAGAGGTTATCCGACATAAC
GACCATAACAGGAGCATCCT

Downstream 100 bases:

>100_bases
CCCTGCAAAATAGCCAATAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCACTTCTAAAAGCAGTATGATGTCATAA
AGTTAAGTGAGAATAATTAA

Product: homeobox protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ

Sequences:

>Translated_126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ
>Mature_126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786968, Length=126, Percent_Identity=99.2063492063492, Blast_Score=249, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020363
- ProDom:   PD079292 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12902; Mature: 12902

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK
CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTQ
CCCCCC
>Mature Secondary Structure
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK
CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]