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The map label for this gene is ybfP [H]

Identifier: 82543123

GI number: 82543123

Start: 566299

End: 566793

Strand: Direct

Name: ybfP [H]

Synonym: SBO_0551

Alternate gene names: 82543123

Gene position: 566299-566793 (Clockwise)

Preceding gene: 82543122

Following gene: 82543126

Centisome position: 12.53

GC content: 45.45

Gene sequence:

>495_bases
ATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTAATTACCGCCACATTACTGCTGACTGCATGCGCCCAACCTGA
ACAATCATCATTAGCTGGCGACTGGTTACTGACCCCTAAAGATAAAACCAGAAGATTAACGGGTAGCATTGCGGTAAATA
TTGCACCTTCCCGGTGTAAGACAAATTGCCGTGGTGATAACTTACCTGATAATACCCGCCGCTGGCAGTTGTCAGGCGGG
AACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACAC
CTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGAT
TTTTTGGCTCGATGATGCATGTCGGGATTATTGAGTTACGACGCTGCCAGTCAGAAAATTGCCAGCAAGAATTGAAAGCG
ATAAATACACATTAA

Upstream 100 bases:

>100_bases
GAATTTACGAGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTG
AGTAGCTCAAGGAAATCCCA

Downstream 100 bases:

>100_bases
AATAGTGAGTCCGGGAATGAAACCCGGACCTGAACATGTCTTATTGCGTGAATGTTTCTTTCATTTGATACTGCATTTCC
CAGAGTTCAGTAAGCGAAAT

Product: pectinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRRLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTH

Sequences:

>Translated_164_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRRLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTH
>Mature_164_residues
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRRLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGG
NEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
INTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786905, Length=164, Percent_Identity=98.780487804878, Blast_Score=339, Evalue=5e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18321; Mature: 18321

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRRLTGSIAVNIAPSRCK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHEEECEEEEEECHHHHC
TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT
CCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRRLTGSIAVNIAPSRCK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHEEECEEEEEECHHHHC
TNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGT
CCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
RPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]