Click here to switch to the map view.

The map label for this gene is ybeQ [H]

Identifier: 82543089

GI number: 82543089

Start: 525981

End: 526964

Strand: Reverse

Name: ybeQ [H]

Synonym: SBO_0508

Alternate gene names: 82543089

Gene position: 526964-525981 (Counterclockwise)

Preceding gene: 82543092

Following gene: 82543087

Centisome position: 11.66

GC content: 46.14

Gene sequence:

>984_bases
ATGATAATGATTTTTACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTG
CGAGGCTCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGACTCTCCGGACGACGAAAAGGCCTTTTACT
GGCTGAAGCTGGCCGCCGAGCAAGGTCATTGTGAAGCACAATATTCCTTAGGACAAAAGTATACTGAGGATAAAAGCCGT
CATAAAGATAATGAGCATGCCATCTTTTGGCTGAAAAAAACTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGG
CTGGATACTGGATCGTGGAGAAGACCCCAATTATAAAGAAGCGGTTGTCTGGTATCAGATAGCCGCGGAGAGCGGAATGT
CTTATGCGCAAAATAATCTTGGGTGGATGTACAGAAATGGCAACGGAGTCGCAAAAGACTATGCGCTGGCATTTTTCTGG
TACAAACAAGCTGCATTACAAGGCCATAGTGACGCGCAAAACAATCTGGCCGATCTTTATGAAGACGGAAAAGGCGTTGC
TCAAAACAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCACGCCCAGTTTCAAATTGCAT
GGGATTATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGAA
AGCGTCGGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCTGCCTTTGA
ATGGTTTACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAA
GACCTGTCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGAACCAGAGATGTCAGTCAGGAAATT
CGTGAGACTGAAGATTTACTGTAG

Upstream 100 bases:

>100_bases
TATTTATACTTTTCTGACGCGACATAATACGCATAAAATAAGGCTTACGCAAAAATGGAACACATAAAATATAATATGTT
TTATCTACAACCATAAGGAA

Downstream 100 bases:

>100_bases
AGATAAAAACAAGGGCCGGGGAATTTCATTCGGCCCATATTCTCTTTATTGCTGTGCGAAATCAGACTATTACGGCTCAA
ACGGGCGTCTCTGGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEHAIFWLKKTALQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFW
YKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEDLL

Sequences:

>Translated_327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEHAIFWLKKTALQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFW
YKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEDLL
>Mature_327_residues
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSR
HKDNEHAIFWLKKTALQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFW
YKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEI
RETEDLL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=324, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI151301150, Length=305, Percent_Identity=28.1967213114754, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=98.4615384615385, Blast_Score=659, Evalue=0.0,
Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=35.4330708661417, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=25.2365930599369, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=275, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=29.2604501607717, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37443; Mature: 37443

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAE
CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
QGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASNALGWILDRGEDPNYKE
CCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHCCHHHEEECCCCCCCCC
AVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLY
EEEEEEEHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
HCCCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQ
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHH
ALDLYRKVQSSGTRDVSQEIRETEDLL
HHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAE
CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
QGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASNALGWILDRGEDPNYKE
CCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHCCHHHEEECCCCCCCCC
AVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLY
EEEEEEEHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQE
HCCCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQ
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHH
ALDLYRKVQSSGTRDVSQEIRETEDLL
HHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]