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The map label for this gene is ybdN [H]

Identifier: 82543047

GI number: 82543047

Start: 483212

End: 484729

Strand: Reverse

Name: ybdN [H]

Synonym: SBO_0463

Alternate gene names: 82543047

Gene position: 484729-483212 (Counterclockwise)

Preceding gene: 82543048

Following gene: 82543046

Centisome position: 10.72

GC content: 47.96

Gene sequence:

>1518_bases
ATGTCTATTTATAAAATTCCTCTTCCGCTCAATATTCTGGAAGCTGCACGAGAGCGTATTACCTGGACACTCAACACCCT
ACCCCGCGTTTGTGTCTCATTTTCTGGCGGCAAAGACTCTGGTTTAATGCTGCATCTGACAGCCGAACTTGCCCGACAAA
TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAGGCGCAATTCTCTTGCACTATTAACTATGTTCAGTCCCTGCGC
GAGTTGTACACCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCACAATACCA
ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTGCGTCAGCCCCCGCAAGATGCGATAACCGATCCTGACTTTT
TCTGCTTTTACCAGCCAGGCATGACCTTCGAACAATTTGTACGTGAGTTTGCCGAATGGTTTTCACAAAAACGTCCGGCG
GCGATGATGATCGGCATCCGTGCGGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC
CGACGATAAACCATGGACTACGGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATTTACGACTGGAAAGTGGCTG
ATATCTGGACCTGGTATGCAAATCATCAAAGTCTCTGCAACCCACTGTATAACCTAATGTATCAGGCAGGCGTTCCTCTG
CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGACAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG
CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGACAATCATTTCTATGGGC
ATCGGAAAATCCTCAAGCCAAAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAGATGAT
CGCATCAAAGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCT
GTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAA
AATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGT
TTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGA
AGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGG
AAATCGTCCGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTG
CTGCGCCTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAG

Upstream 100 bases:

>100_bases
GCGCGAATGAAAAATAAAACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGTCTTATCTCACTGTTCACCCTGTAA
CGTTCAGAGAGCGTCTTCAG

Downstream 100 bases:

>100_bases
CTAAAGCTGGCGCAGGCGTTCAGCTGCTGCCAGCAACGTCGATTCCTTCTTGGCAAAACAGAGACGAATCAGTTTATGTG
GGAAGGGATCGGCGCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLR
ELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPKHLDWQEYALLLLNSMPEDD
RIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDG
FHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
LRLKQINGLQELFADRQYSRAWTVK

Sequences:

>Translated_505_residues
MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLR
ELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPKHLDWQEYALLLLNSMPEDD
RIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDG
FHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
LRLKQINGLQELFADRQYSRAWTVK
>Mature_504_residues
SIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRE
LYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPAA
MMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPLR
HMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPKHLDWQEYALLLLNSMPEDDR
IKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGF
HRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEVL
RLKQINGLQELFADRQYSRAWTVK

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=333, Percent_Identity=96.0960960960961, Blast_Score=678, Evalue=0.0,
Organism=Escherichia coli, GI1786817, Length=194, Percent_Identity=98.4536082474227, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 58690; Mature: 58559

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICV
CCEEEECCCHHHHHHHHHHEEEEHHHHHHHHEEECCCCCCCEEEEEHHHHHHHCCCEEEE
LFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCCCCCCCHHHH
RQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS
CCCCHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL
CCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHEEEECCCHHHHHHHHHHHHHHCCCCH
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP
HHHEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYN
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
PNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGY
CCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
LPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
EEEEEECCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
LRLKQINGLQELFADRQYSRAWTVK
HHHHHHCCHHHHHCCCCCCCEECCC
>Mature Secondary Structure 
SIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICV
CEEEECCCHHHHHHHHHHEEEEHHHHHHHHEEECCCCCCCEEEEEHHHHHHHCCCEEEE
LFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCCCCCCCHHHH
RQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS
CCCCHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL
CCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHEEEECCCHHHHHHHHHHHHHHCCCCH
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP
HHHEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYN
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
PNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGY
CCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
LPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
EEEEEECCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
LRLKQINGLQELFADRQYSRAWTVK
HHHHHHCCHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]