Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ylbG [H]

Identifier: 82542994

GI number: 82542994

Start: 422935

End: 423342

Strand: Reverse

Name: ylbG [H]

Synonym: SBO_0404

Alternate gene names: 82542994

Gene position: 423342-422935 (Counterclockwise)

Preceding gene: 82542995

Following gene: 82542988

Centisome position: 9.37

GC content: 49.75

Gene sequence:

>408_bases
GTGTCGAATCCTTATCCAAAACAAGAGGTAACTCTCATGCTTCATACTGCCAATCCCGTCATCAAACACAAAGCCGGTTT
GCTCAATCTGGCTGAAGAACTCAGCAACGTATCAAAAGCCTGTAAAATCATGGGCGTTTCGCGTGATACGTTTTATCGTT
ACCGCGAACTGGTCGCTGAAGGCGGTGTGGATGCGCAGATTAATCGTAGTCGCCGCGCTCCTAACCTTAAGAACCGTACC
GATGAGGCAACTGAACAGGCTGTTGTTGATTACGCCGTCGCTTTCCCGACACATGGTCAGCACCGGGCCAGCAACGAGCT
GCGTAAACAGGGGGGTTTTATCTCCGACAGTGGTGTCCGTTCTGTCTGGTTACTCCATAACCTTGAGAATCTCAAAAGAC
GATACTGA

Upstream 100 bases:

>100_bases
GAATGGGTTAAGGCGCGGTAATGAGGGACGTATTTGTATTAGTCGCGACTTGATCTGACACATGGCCTTGAAAGGTTGAG
AGTTACCGGTTTTGATATGA

Downstream 100 bases:

>100_bases
ACAAATTTTATCAGGTGACGTTCCGTAAAAAGTTGTATGGAGTTCTCGATGCAGTCGGCGCGACTATCAGTACCCCCGCT
GAACCCTGGACTATCGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT
DEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY

Sequences:

>Translated_135_residues
MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT
DEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY
>Mature_134_residues
SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTD
EATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15263; Mature: 15131

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCH
SVWLLHNLENLKRRY
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCH
SVWLLHNLENLKRRY
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]