| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ylbG [H]
Identifier: 82542994
GI number: 82542994
Start: 422935
End: 423342
Strand: Reverse
Name: ylbG [H]
Synonym: SBO_0404
Alternate gene names: 82542994
Gene position: 423342-422935 (Counterclockwise)
Preceding gene: 82542995
Following gene: 82542988
Centisome position: 9.37
GC content: 49.75
Gene sequence:
>408_bases GTGTCGAATCCTTATCCAAAACAAGAGGTAACTCTCATGCTTCATACTGCCAATCCCGTCATCAAACACAAAGCCGGTTT GCTCAATCTGGCTGAAGAACTCAGCAACGTATCAAAAGCCTGTAAAATCATGGGCGTTTCGCGTGATACGTTTTATCGTT ACCGCGAACTGGTCGCTGAAGGCGGTGTGGATGCGCAGATTAATCGTAGTCGCCGCGCTCCTAACCTTAAGAACCGTACC GATGAGGCAACTGAACAGGCTGTTGTTGATTACGCCGTCGCTTTCCCGACACATGGTCAGCACCGGGCCAGCAACGAGCT GCGTAAACAGGGGGGTTTTATCTCCGACAGTGGTGTCCGTTCTGTCTGGTTACTCCATAACCTTGAGAATCTCAAAAGAC GATACTGA
Upstream 100 bases:
>100_bases GAATGGGTTAAGGCGCGGTAATGAGGGACGTATTTGTATTAGTCGCGACTTGATCTGACACATGGCCTTGAAAGGTTGAG AGTTACCGGTTTTGATATGA
Downstream 100 bases:
>100_bases ACAAATTTTATCAGGTGACGTTCCGTAAAAAGTTGTATGGAGTTCTCGATGCAGTCGGCGCGACTATCAGTACCCCCGCT GAACCCTGGACTATCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT DEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY
Sequences:
>Translated_135_residues MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT DEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY >Mature_134_residues SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTD EATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVRSVWLLHNLENLKRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15263; Mature: 15131
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCH SVWLLHNLENLKRRY HHHHHHHHHHHHHCC >Mature Secondary Structure SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGGFISDSGVR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCH SVWLLHNLENLKRRY HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]