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The map label for this gene is ybaT [H]

Identifier: 82542980

GI number: 82542980

Start: 406398

End: 407690

Strand: Direct

Name: ybaT [H]

Synonym: SBO_0388

Alternate gene names: 82542980

Gene position: 406398-407690 (Clockwise)

Preceding gene: 82542979

Following gene: 82542981

Centisome position: 8.99

GC content: 53.21

Gene sequence:

>1293_bases
ATGATGAACACGGAAGGTAATAACGGTAACAAACCCCTCGGTCTATGGAATGTCGTTTCCATCGGTATTGGGGCAATGGT
GGGGGCGGGGATCTTCGCGCTGCTGGGGCAGGCTGCGTTGCTAATGGAAGCCTCGACCTGGGTCGCCTTTGCTTTTGGCG
GTATTGTGGCGATGTTTTCCGGTTATGCCTATGCGCGTCTGGGGGCGAGCTATCCCAGCAATGGCGGCATTATCGACTTC
TTTCGTCGCGGATTAGGCAACGGCGTCTTTTCGCTGGCGCTCTCGTTACTGTACCTGTTGACGCTGCCGGTGAGCATCGC
CATGGTCGCCCATGCTTTTGGCGCTTATGCCGTGCAGTTTTTGCATGAAGGCAGCCAGGAGGAGCACCTTATTTTGCTCT
ACGCGTTGGGGAGCATTGCGGTGATGACGCTTTTCAACTCCTTAAGCAACCATGCGGTAGGGCGGCTGGAAGTGATCCTC
GTCGGCATTAAAATGATGATCCTGTTATTGCTGATTATTGCCGGTGTCTGGTCGCTGCAACCAGCGCATATTTCCGTCTC
TGCGCCCCCCAGCTCCGGTGCGTTCTTCTCCTGTATTGGGATAACTTTCCTTGCCTATGCGGGCTTTGGCATGATGGCGA
ACGCGGCGGATAAAGTGAAAGATCCGCAGGTCATTATGCCACGGGCGTTTCTGGTGGCGATTGGCGTTACCACGTTGCTT
TATATCTCGCTGGCACTGGTTTTGCTTAGCGATGTATCGGCATTAGAGTTAGAAAAATATGCCGATACCGCCGTAGCGCA
GGCTGCTTCTCCGCTGCTCGGACATGTGGGTTATGTGATCGTCGTCATCGGCGCTTTACTGGCGACGGCTTCAGCCATTA
ACGCGAACCTGTTCGCCGTGTTTAACATCATGGACAACATGGGCAGCGAACGCGAACTGCCGAAGCTAATGAATAAATCC
CTGTGGCGGCAGAGTACCTGGGGCAACATCATTGTCGTGGTGTTGATTATGCTGATGACGGCGGCACTGAATTTAGGCTC
ACTCGCCAGCGTTGCCAGCGCCACCTTTTTGATTTGCTACCTGGCGGTGTTTGTGGTGGCGATCCGCCTGCGTCATGATA
TTCACGCCTCGTTGCCGATTCTTATCGTTGGTACGTTGGTGATGTTGTTGGTGATCGTTGGCTTTATCTACAGTCTGTGG
TCCCAGGGTAGCCGTGCGTTGATATGGATTATTGGCTCACTCTTACTCAGCCTTATTGTGGCAATGGTCATGAAGCGCAA
TAAAACCGTATAA

Upstream 100 bases:

>100_bases
TCTCACCACCGCTGGACGAAGAAGGTAACAGTGTTCGCGGTCAAAAAATGGTGGCATCGGTCGCTAAGCAACTCGGCTAT
AACGTGTTTAAGGGCTGATC

Downstream 100 bases:

>100_bases
CATCTCTCTGTGCGCAGTACTTCCTGTATTATTGTGGTGGCGGTCGATATTCGCACTGGCAAAAAAACGTGCTTGAATAT
CTGTTGAAACCCTTTAACAA

Product: amino acid/amine transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLPVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGSLLLSLIVAMVMKRNKTV

Sequences:

>Translated_430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLPVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGSLLLSLIVAMVMKRNKTV
>Mature_430_residues
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDF
FRRGLGNGVFSLALSLLYLLTLPVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKS
LWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLW
SQGSRALIWIIGSLLLSLIVAMVMKRNKTV

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=305, Percent_Identity=24.2622950819672, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1786694, Length=430, Percent_Identity=99.3023255813954, Blast_Score=833, Evalue=0.0,
Organism=Caenorhabditis elegans, GI71995382, Length=331, Percent_Identity=25.0755287009063, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71995388, Length=331, Percent_Identity=25.0755287009063, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221331183, Length=304, Percent_Identity=25.6578947368421, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17647653, Length=304, Percent_Identity=25.6578947368421, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24664379, Length=304, Percent_Identity=25.6578947368421, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45550968, Length=402, Percent_Identity=23.134328358209, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19921172, Length=402, Percent_Identity=23.134328358209, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24651635, Length=315, Percent_Identity=22.5396825396825, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651633, Length=315, Percent_Identity=22.5396825396825, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24667468, Length=333, Percent_Identity=25.5255255255255, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24641995, Length=304, Percent_Identity=24.0131578947368, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45640; Mature: 45640

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLPVSIAMVAHAFGAYAVQF
CHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQ
HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
CCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHH
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICY
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AMVMKRNKTV
HHHHHCCCCC
>Mature Secondary Structure
MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLPVSIAMVAHAFGAYAVQF
CHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQ
HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLL
CCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHH
YISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICY
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AMVMKRNKTV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]