Click here to switch to the map view.

The map label for this gene is ylaB [H]

Identifier: 82542947

GI number: 82542947

Start: 368134

End: 369630

Strand: Reverse

Name: ylaB [H]

Synonym: SBO_0353

Alternate gene names: 82542947

Gene position: 369630-368134 (Counterclockwise)

Preceding gene: 161984976

Following gene: 82542945

Centisome position: 8.18

GC content: 48.03

Gene sequence:

>1497_bases
ATGCTGCCTGTCGGCTTAAGCATCTGGCTGGCCCATCAGCAGGTAGAAACATCGTTTATTGAAGAGCTGGATACCTATTC
CTCCCGCGTCGCTATTCGGGCCAATAAGGTGGCGACACAAGGGAAAGATGCGCTGCAAGAGCTGGAAAGATGGCAAGGCG
CTGCCTGTAGCGAAGCCCATCTCATGGAAATGCGTCGGGTATCTTACAGTTATCGCTATATTCAGGAAGTGGTTTATATC
GATAACAACGTTCCCCAGTGTTCGTCTCTGGAGCATGAAAGTCCGCCCGATACCTTCCCCGAGCCAGGTAAAATTTCGAA
AGATGGTTATCGTGTCTGGTTAACATCGCATAACGATTTAGGCATTATCCGTTACATGGTCGCCATGGGAACGGCACATT
ATGTCGTCATGATCGACCCCGCTTCCTTTATTGATGTCATTCCCTATAGCTCATGGCAAATTGATGCCGCCATTATTGGC
AATGCCCATAACGTTGTCATAACCAGCAGCGATGAAATTGCTCAGGGAATTATTACCAGGCTACAAAAAACACCCGGTGA
GCATATCGAAAATAATGGAATCATTTACGATATCCTGCCCTTCCCGGAGATGAATATTTCGATCATCACCTGGGCTTCAA
CGAAAATGTTGCAGAAAGGCTGGCATCGGCAAGTCTTTATTTGGTTACCGCTCGGGTTGGTGATTGGCCTGCTGGCAGCG
ATGTTTGTGCTGCGTATTTTGCGCCGTATCCAGTCACCGCATCATCGGCTGCAGGATGCTATCGAAAATCGTGATATTTG
CGTGCACTATCAGCCGATTGTCTCCTTAGCCAATGGCAAAATTGTCGGTGCTGAGGCACTGGCGCGCTGGCCGCAGACAG
ACGGTAGTTGGTTGTCACCAGATAGTTTTATTCCGCTGGCACAGCAAACAGGCCTTTCTGAGCCATTGACGCTACTGATT
ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGCGTCAGCATCCACAGCAGCATATTTCGATCAATCTTGAATCCAC
CGTGCTCACCTCGGAAAAAATCCCGCAATTGCTGCGTGAAATGATCAATCACTATCAGGTTAATCCCAGACAGATCGCGC
TTGAACTCACTGAACGCGAGTTTGCCGATCCGAAAACCAGCGCCCCGATAATTTCTCGCTACCGGGAGGCGGGCCATGAA
ATTTATCTTGATGATTTTGGTACGGGATATTCAAGTTTAAGTTATTTACAGGATCTGGATGTCGACATTCTGAAGATCGA
TAAATCTTTCGTTGATGCGCTGGAATATAAAAATGTCACGCCGCATATCATCGAAATGGCAAAAACACTGAAACTGAAAA
TGGTAGCGGAGGGAATCGAAACCAGTAAACAAGAAGAGTGGCTACGCCAGCATGGCGTGCACTACGGTCAGGGCTGGCTC
TACAGCAAGGCATTACCGAAAGAAGATTTCTTACGCTGGGCCGAGCAACATTTGTGA

Upstream 100 bases:

>100_bases
CATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCT
GGAAATATAGGGGCAAATCC

Downstream 100 bases:

>100_bases
ATTTTTGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACC
GATTTTGAGAACGACAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYI
DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG
NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAA
MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI
IRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE
IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
YSKALPKEDFLRWAEQHL

Sequences:

>Translated_498_residues
MLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYI
DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG
NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAA
MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI
IRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE
IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
YSKALPKEDFLRWAEQHL
>Mature_498_residues
MLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYI
DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG
NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAA
MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI
IRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE
IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
YSKALPKEDFLRWAEQHL

Specific function: Unknown

COG id: COG4943

COG function: function code T; Predicted signal transduction protein containing sensor and EAL domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=498, Percent_Identity=98.995983935743, Blast_Score=1019, Evalue=0.0,
Organism=Escherichia coli, GI1790496, Length=511, Percent_Identity=33.4637964774951, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI87081845, Length=293, Percent_Identity=34.4709897610922, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI226510982, Length=237, Percent_Identity=35.8649789029536, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI1788502, Length=270, Percent_Identity=31.4814814814815, Blast_Score=146, Evalue=4e-36,
Organism=Escherichia coli, GI1787541, Length=247, Percent_Identity=30.3643724696356, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI87081980, Length=236, Percent_Identity=36.4406779661017, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1786507, Length=245, Percent_Identity=33.0612244897959, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI87081921, Length=245, Percent_Identity=33.469387755102, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1788849, Length=263, Percent_Identity=30.4182509505703, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI87082096, Length=246, Percent_Identity=31.3008130081301, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1787055, Length=241, Percent_Identity=26.9709543568465, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 56873; Mature: 56873

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHCCHHHHHHHHHHCCCCCCHHH
LMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR
HHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHH
LQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAA
HHHCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHCCCCCEEEEEEHHHHHHHHHHH
MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP
HHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCEECHHHHHHCCCCCCCCCCC
DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLRE
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHHHHHHHHHH
MINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD
HHHHCCCCHHHEEEEEHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
VDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
CHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEE
YSKALPKEDFLRWAEQHL
ECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHCCHHHHHHHHHHCCCCCCHHH
LMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR
HHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHH
LQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAA
HHHCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHCCCCCEEEEEEHHHHHHHHHHH
MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP
HHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCEECHHHHHHCCCCCCCCCCC
DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLRE
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHHHHHHHHHH
MINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD
HHHHCCCCHHHEEEEEHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
VDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
CHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEE
YSKALPKEDFLRWAEQHL
ECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]