| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ykiA [H]
Identifier: 82542883
GI number: 82542883
Start: 297839
End: 298120
Strand: Direct
Name: ykiA [H]
Synonym: SBO_0287
Alternate gene names: 82542883
Gene position: 297839-298120 (Clockwise)
Preceding gene: 82542882
Following gene: 82542888
Centisome position: 6.59
GC content: 48.58
Gene sequence:
>282_bases TTGCTGCAAAGTCGCAATGATCATTTGCGCCAAACGGCATTACGCAACGCACATACCCCGGCGTCGTTGTTAACGACATT GACCGAGTCTCGGCATCGGTCGCTAGCTATGAATAATCCACAGCTCGCTGCCGATGTGAAAACGACGTGGTTAAAAGAGG ATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGGGATTTAGTGAAAACCGGGGCAATGCGGAAA ATTCGCAGTGAAGCGCGTCACTGGCTTGAGGAAAAACAATGA
Upstream 100 bases:
>100_bases AATTCATCAAGGTTGATATAAATATCAGTGAAGATCTCCAGATATTGTTGCGGAACTGGCTACGATAAAAGATAAATCAG ATGATGAATGGTGGCGTGCA
Downstream 100 bases:
>100_bases CACAACGTCCATGGAGCAAGTTACAGCATAAAACGCATAATATTGCTGCGCTAAAAATTATTGTCCGCCGTAGCGAATAA TTATATCCCTGGTGTGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MLQSRNDHLRQTALRNAHTPASLLTTLTESRHRSLAMNNPQLAADVKTTWLKEDPSLLLFVEQPDLSLLRDLVKTGAMRK IRSEARHWLEEKQ
Sequences:
>Translated_93_residues MLQSRNDHLRQTALRNAHTPASLLTTLTESRHRSLAMNNPQLAADVKTTWLKEDPSLLLFVEQPDLSLLRDLVKTGAMRK IRSEARHWLEEKQ >Mature_93_residues MLQSRNDHLRQTALRNAHTPASLLTTLTESRHRSLAMNNPQLAADVKTTWLKEDPSLLLFVEQPDLSLLRDLVKTGAMRK IRSEARHWLEEKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ydbD C-terminal region [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10740; Mature: 10740
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSRNDHLRQTALRNAHTPASLLTTLTESRHRSLAMNNPQLAADVKTTWLKEDPSLLLF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEE VEQPDLSLLRDLVKTGAMRKIRSEARHWLEEKQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLQSRNDHLRQTALRNAHTPASLLTTLTESRHRSLAMNNPQLAADVKTTWLKEDPSLLLF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEE VEQPDLSLLRDLVKTGAMRKIRSEARHWLEEKQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]