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The map label for this gene is yaiU [H]

Identifier: 82542865

GI number: 82542865

Start: 282183

End: 283589

Strand: Direct

Name: yaiU [H]

Synonym: SBO_0269

Alternate gene names: 82542865

Gene position: 282183-283589 (Clockwise)

Preceding gene: 161984982

Following gene: 82542866

Centisome position: 6.24

GC content: 49.61

Gene sequence:

>1407_bases
GTGCTGGATGTGAATGTTGATCAGTTCGATACTGAAGCTTTCCGTACTGATAAACTGGAACTGACCAGCGGCAACATTGC
TGACCATAATGGCAACGTAATTTCTGGTGTGTTCGACATCAACAGCAGCGATTACGTTCTGAACGCTGATCTGGTGAACG
ACCGTACGTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAAT
GGTAACGGCGACGTAGACAACGGTACTGAACTGGATAACAGCTCTGTTGATAACGTTGTTGCTGCAACCGGTAACTACAA
AGTTCGTATCGACAACGCAACTGGCGCTGGCACTATCGCTGATTACAAAGATAAAGAACTTATTCGGGTAAACGACGCTA
ACACCAACGCGACCTTCTCTGCTGCTAACAAAGCTGACCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACC
GTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAA
CCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTGATAACGGCGGCGCATGGGTAAGCT
ACTTCGGTGGTAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGAT
ACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTC
TGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTA
GCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAACCATGAGCAACGGTACTTACGTTGACGGTAGCACCAACTCT
GACGCGTGGGGCTTCGGTTTGAAAGCCGGTTACGACTTCAAACTGGGTGATGCTGGTTACGAGACTCCTTACGGCAGCGT
TTCTGGTCTGTTCCAGTCTGGTGATGACTACCAGCTGAGCAACGACATGAAAGTTGACGGTCAGTCTTACGACAGCATGC
GTTATGAACTGGGTGTAGATGCAGGTTATACCTTCACCTACAGCGAAGATCAGGCTCTGACTCCGTACTTCAAACTGGCT
TACGTCTACGACGACTCAAACAACGATAACGATGTGAACGGTGATTCCATCGATAACGGTACTGAAGGGTCTGCGGTACG
TGTTGGTCTGGGTACTCAGTTCAGCTTCACCAAGAACTTCAGCGCCTATACCGATGCTAACTACCTCGGTGGTGGTGACG
TAGATCAAGACTGGTCCGCGAACGTGGGTGTTAAATATACTTGGTAA

Upstream 100 bases:

>100_bases
GACTGTTGATAGCTACAGTACCGTTAATTTAACCGAATCTACCGGTTGGAATAATTATTCTAATCTGTATACCAATACTA
TCACTGTGACTAACGGTGGT

Downstream 100 bases:

>100_bases
TATTCTTCACTCCGAAGAAATTCTGGTAATTTAATCTAAATAATGCCCGTCAAGGATTTGACGGGCATTACTGCAAAGGA
CGCGCAAATGTTATCTGTAG

Product: flagellin structural protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTIN
GNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNT
VVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVD
TKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLA
YVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW

Sequences:

>Translated_468_residues
MLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTIN
GNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNT
VVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVD
TKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLA
YVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW
>Mature_468_residues
MLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTIN
GNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNT
VVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVD
TKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLA
YVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082145, Length=305, Percent_Identity=25.5737704918033, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 50466; Mature: 50466

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNADLVNDRTWDTS
CCCCCCCCCCCCHHCCCEEEEECCCEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC
KSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGTIA
CCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCC
DYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPS
CCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEHHHCCCEEEEEEEECCCCCCEEEECCC
ANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVD
CCCEEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCEECCCCCEEEECCCCCEEEEEEE
TKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHF
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCEEHHHC
NNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLS
CCCEEEEECCCEEECCCCCCCCEECCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEC
NDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNG
CCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
TEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW
CCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNADLVNDRTWDTS
CCCCCCCCCCCCHHCCCEEEEECCCEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC
KSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGTIA
CCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCC
DYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPS
CCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEHHHCCCEEEEEEEECCCCCCEEEECCC
ANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVD
CCCEEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCEECCCCCEEEECCCCCEEEEEEE
TKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHF
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCEEHHHC
NNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLS
CCCEEEEECCCEEECCCCCCCCEECCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEC
NDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNG
CCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
TEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW
CCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]